KEGG   Helicobacter felis: HFELIS_03800
Entry
HFELIS_03800      CDS       T01375                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D, TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
hfe  Helicobacter felis
Brite
KEGG Orthology (KO) [BR:hfe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hfe03016]
    HFELIS_03800 (truD)
Enzymes [BR:hfe01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     HFELIS_03800 (truD)
Transfer RNA biogenesis [BR:hfe03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    HFELIS_03800 (truD)
 Prokaryotic type
    HFELIS_03800 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: CBY82464
UniProt: E7A986
Position
349628..350746
AA seq 372 aa
MHTLTSPFFPLDLPSRFFASSHAPIDFYFKKCSRDFSVCEEPLYPFSGSGDHTILKVRKK
DRSTWEMLSLFSQISGCKMADFGYAGLKDKQAITTQYISLPKIHAPALEKHTPTLLEHGI
KILEISAHSHKIRLGHLKGNHFFMRLKKLKPTDAHKIEQVLGFLKTYGFPNYFGAQRFGK
RGDNFKQSAPRSKKLNAFFLSSYQSHLFNHWLSARMRLNTLLAHFSAQELRAEFANLKLD
TLKALQDQEHYFKLLEGDILCHYPFGKYFVHEDPLNSARLITQEIAPTGLLTGQKVMHAQ
NLAWSLECPYAHPLKAQGDRRYALVFPAEVRFSYISQEAQGTLEFFLPKGAYATIFLEEI
AGRTLFSSKELT
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgcacacattaacatcgcccttttttcctttggatttaccctcgcgcttttttgcctcc
tctcacgcgcccatagacttttattttaaaaaatgctcacgggattttagcgtgtgtgaa
gagcctctttatccttttagcggctctggcgatcacaccattttaaaagtgcgcaagaaa
gatcggagcacatgggagatgttaagcttattctcccaaatcagcgggtgcaaaatggca
gattttggctatgccgggctcaaagataagcaagccatcaccacgcaatatatttctcta
cccaaaatccacgcccccgccctagaaaaacacacccccactctgctagaacatggtatt
aagattttagaaatcagtgcccacagccataaaatccgcttagggcatctcaagggcaac
cacttcttcatgcgcttaaaaaagcttaaacccacagatgcgcacaaaatagagcaggtg
ttaggttttcttaaaacttatggctttccgaattactttggagcgcaacgctttggcaag
agaggagacaatttcaaacaatccgccccgcgttctaaaaaactcaacgccttttttctc
tctagctaccaaagccatctctttaaccactggctcagcgcgcgcatgcgcttgaatact
ttactagcccatttttccgcccaagaactgcgcgcggagtttgcaaatttaaagttagat
accctcaaagctctacaagatcaagaacattattttaaactcctagagggggatattctc
tgtcattacccctttggaaaatactttgtgcatgaagacccactcaatagcgcgcgcttg
atcacccaagagatcgcccccaccggtttgctcaccggacagaaggttatgcatgctcaa
aatctagcttggtctttagagtgcccctatgcccacccccttaaagcacaaggagatcgc
cgttatgcccttgtctttcctgctgaggtgcgctttagttatatctcccaagaagcacag
ggaacattagagttttttctacccaagggggcgtatgcgaccatctttttagaggagatc
gccggacgcaccctattttcctcaaaggagttaacatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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