KEGG   Helicobacter felis: HFELIS_08970
Entry
HFELIS_08970      CDS       T01375                                 
Name
(GenBank) ribosomal pseudouridine synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
hfe  Helicobacter felis
Brite
KEGG Orthology (KO) [BR:hfe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hfe03009]
    HFELIS_08970
Enzymes [BR:hfe01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     HFELIS_08970
Ribosome biogenesis [BR:hfe03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HFELIS_08970
SSDB
Motif
Pfam: PseudoU_synth_2 ssDNA_DBD
Other DBs
NCBI-ProteinID: CBY82981
UniProt: E7AC94
Position
complement(881449..882357)
AA seq 302 aa
MPFVREVFEISTPTPAWRFVAQVLNCNPARAQSHIDRGRLRTLEGVRVGKSAHIVGQVAL
LHFKASESANLHPIFSSPYFDIYYKPKNLYSHPKNYKSHSLYESVYAHNPEARLIHRLDY
ETSGLVMVSTQKRYENALRELFSARQIKKTYEAWVQGDVRAYAQGPFSVILRILEPKIKI
KHADLAIRCQIAKEGKPSATTIEILNFCPHTQRTHLKITPLSGRTHQIRLHLSALGFPIV
GEPLYTDDAHARAYLDAKKADFQGSFKSLQTQLALEAIELKFSLFGLRYGISCSYYNKRT
DI
NT seq 909 nt   +upstreamnt  +downstreamnt
atgccctttgtgcgcgaagtctttgagatttccacccctacaccagcgtggcgctttgtc
gcgcaagtgttaaactgcaaccccgcgcgcgcccaaagccacattgatcgggggcgtttg
cgcactcttgagggggtgcgggtgggcaaatccgcgcacatagtcggtcaagttgctcta
ttacactttaaagcctcagagtctgcaaatttacaccctatctttagcagtccttatttt
gacatctactacaagcctaaaaatctctactctcaccctaaaaattacaagagtcatagt
ctttatgaaagcgtgtatgcgcataaccctgaggcgcgcctcatccaccgcctcgattat
gagaccagcggattagtgatggtgagtacacagaagcgttatgaaaacgcattaagagag
ctttttagcgcgcgtcaaattaaaaaaacttatgaggcatgggtgcagggggatgtgcgc
gcttacgcacaaggtccttttagtgtgatcttaagaattttagaacccaagatcaagatc
aagcacgcggatttggccatccgttgccagattgccaaagagggcaagcctagcgcgacc
actatagaaattttaaacttttgtcctcacacccagcgcacacaccttaaaatcactccc
ctaagcgggcgcacgcatcaaatccgcctgcacttgagcgcgctaggtttccccattgtg
ggcgaaccgctctatacagacgacgcgcacgcacgcgcctatttagatgccaaaaaagca
gattttcaaggcagctttaagtccctgcaaacccaactcgccttagaagctatagagtta
aaatttagcctttttggtttgaggtatgggattagttgctcttattacaataagaggact
gacatttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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