KEGG   Herbaspirillum frisingense: G5S34_05640
Entry
G5S34_05640       CDS       T06761                                 
Name
(GenBank) ABC transporter substrate-binding protein
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
hfr  Herbaspirillum frisingense
Pathway
hfr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hfr00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    G5S34_05640
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hfr02000]
    G5S34_05640
Transporters [BR:hfr02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    G5S34_05640
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: QNB06298
UniProt: A0A7G6ATG4
Position
1246710..1248341
AA seq 543 aa
MSKQENGRLPAEGSIITDLSLENAQGGFTRRDMMRTLLAGSLMTVGGSGLLTASGSAMAQ
AAQTGKRGGKMRIATQTSSTADTLDPAKTAHSTDYTRAHMFYNGLTKLDGKLAPQMVLAE
EMLTNDAITWTVKLKKGVTFHDGKPFTPADVVFSLMRHKDPATASKVKVLADQIESVKAT
GPNEVQIKLTSANADLPVILATAQFLIVRDGTTNFSSANGTGAFKLKEFTPGVRTIGVRN
ENYWKSGLPYLDEVELFGIPDEAARVNALLSGDVHWINDVNARSTGRVKGTAGYTVMETK
SGQYTDLVIRQDVAPGNSMDFTLGMKYLLDREQIKMAAFRGYAVTANDQPIDPTNRFYFA
GLPQRAFDPDKAKFHLEKAGVMGSTIPVVASVAATGSVDMAVLMQQSAAKIGLKLDVKRV
PADGYWSNQWMKVPVGFGNINPRPSADILLTQFFKSDAQWNESGWKNAQFDQLVVAARGE
TDFTKRKSMYADLQTLIHEKCGIGIPVFIINLEGMSTKVKGIDPVPLGAFMNYTCAEYVW
LDA
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgagcaagcaggaaaacggacgactccccgcagagggctccatcatcaccgacctatcg
ctggaaaatgcgcagggcggtttcacccgccgcgacatgatgcgcaccctgctggccggt
agtctcatgacggtgggcggcagcggcctgctcacggccagcggcagcgcaatggcgcag
gcggcacagaccggcaagcgcggtggcaagatgcgcatcgccacccagaccagttccacc
gccgacaccctggacccggccaagaccgcgcactccaccgactacacccgggcgcacatg
ttctacaacggtctgaccaagctggacggcaagctggcgccgcagatggttctggccgag
gaaatgctcaccaacgacgccatcacctggaccgtcaagctgaagaagggcgtgaccttc
cacgacggcaagcccttcaccccggccgacgtggtcttctcgctcatgcgccacaaggac
ccggccaccgcctccaaggtcaaggtgctggccgaccagatcgaatcggttaaggccacc
ggtcccaatgaagtgcagatcaagctcaccagcgccaatgccgacctgccggtgatcctg
gcgaccgcgcagttcctgatcgtgcgcgacggcaccaccaacttcagcagcgccaacggc
accggtgccttcaagctcaaggaattcacccccggcgtgcgcaccatcggcgtacgcaac
gaaaactactggaagagcggcctgccctacctggacgaggtcgaactgttcggcatcccc
gacgaggcggcccgcgtcaatgcgctgctctccggcgacgtgcactggatcaacgacgtc
aacgcccgctccaccggccgcgtcaagggtaccgccggttataccgtcatggaaaccaag
tcgggccagtacaccgatctggtcatccgccaggacgtggcacccggcaacagcatggac
ttcaccctgggcatgaagtacctgctggaccgcgaacagatcaagatggccgccttccgc
ggttacgccgtcaccgccaacgaccagccgatcgaccccaccaaccgcttctacttcgcc
ggcctgccgcagcgcgccttcgatcccgacaaggccaagttccatctggagaaggccggt
gtcatgggcagcaccattccggtcgtggcctcggtggccgccaccggctcggtggacatg
gccgtgctgatgcagcagagcgccgccaagatcggcctgaagcttgatgtcaagcgcgtc
ccggccgatggctactggtccaaccagtggatgaaggtgccggtcggcttcggcaacatc
aatccgcgccccagcgccgacatcctgctgacccagttcttcaagtcggatgcccagtgg
aacgaatcgggctggaagaatgcccagttcgaccagctggtggtggccgcacgcggcgag
accgacttcaccaagcgcaagtccatgtatgccgacctgcagaccttgatccacgagaaa
tgcggcatcggtatcccggtcttcatcatcaacctggaaggcatgagcaccaaggtcaag
ggcatcgatccggtgccgctgggtgccttcatgaactacacctgtgccgagtacgtctgg
ctggatgcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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