KEGG   Herbaspirillum frisingense: G5S34_21840
Entry
G5S34_21840       CDS       T06761                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
hfr  Herbaspirillum frisingense
Pathway
hfr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hfr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    G5S34_21840 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hfr02044]
    G5S34_21840 (tssH)
Secretion system [BR:hfr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   G5S34_21840 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small Clp_N AAA_22 nSTAND3 AAA_7 Sigma54_activat AAA_25 NACHT TniB T2SSE DUF3418 AAA_30 Zeta_toxin AAA_24 SRP54 SLFN-g3_helicase DUF815
Other DBs
NCBI-ProteinID: QNB09129
UniProt: A0A7G6B1J5
Position
complement(4826803..4829478)
AA seq 891 aa
MSINLKSLIGKLNETSRMATERAATLCMSRGQYEVDLEHLFLALLEQPQSDFSLIAHHSG
VSNDSLQADLEHEIASFKNGNTRTPVLSPHLQTLFEHAWLIASLEGSNPRIRSGHLLLSL
LTHSELSQLAYRGSRLFAHFKIEQIKHDLRKLTVGSVESAVGIEYSVSPEDSGLSQGDPV
GEMQVGSGGKTAVLDQYTINLTQLARLGKVDPVVGRDAEIRQAVDILLRRRQNNPILTGE
AGVGKTAVVEGLALSIVRGDVPQALQGVEIHTLDMGLLQAGASVKGEFENRLKNVIDAVK
SSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWTEYKKYFEKDA
ALARRFQVIKIEEPNEETACAMLRAMVPLMEGHFGVRIYDEAVKEAVRLSHRYITGQQLP
DKAVSVLDTACARVALGQSATPPSLGDLKRRLEEIDAEMLALEREVAIDIAHEARLTQLS
RQRVATLAHLEALKARWQRERELNEHIQNVRATLEMQTQEGSPGQDPAQARAELRQLMDE
LRLYQGETPLLPVQVDGQIVAEIVSGWTGIPLGKMVKDEIKTVLGLDALLQERVLGQRHA
TDAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTETALTLADVLYGGERKLITINMSE
YQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLELFFQVFDK
GVLDDGEGRQIDFRNCIIILTSNVASAQMMQACLNKVSDELPTPDELDALIRPQLVRAFK
PAFLGRLKVIPYYPIADDILVKIIELKLSRIAKRIEANHKAEFVYDKTLVDAVLARCTEV
DSGARNVDNILNGSLLPEIAGSVLARMAEAQGISRIKVSASKKGVFKYVIQ
NT seq 2676 nt   +upstreamnt  +downstreamnt
atgagcatcaatctgaaatcgctgatcggcaagctgaacgaaaccagccgcatggctact
gagcgtgctgccacgctgtgcatgtcacgcgggcagtacgaagtcgacctggaacacttg
ttcctggccttgctggaacagccgcaatccgacttcagtctgattgctcaccacagcggg
gtcagtaacgacagcctgcaggctgatctcgagcatgagatcgccagcttcaagaacggc
aatacgcgcacgccagtcctgtccccccacttgcagaccttgttcgagcatgcgtggctc
attgcctcgctggagggcagcaatccccggatccgcagcgggcatctcttgctttccctg
ctgacccatagcgagttatcgcaactcgcctatcgtggctcccggctgttcgcccatttc
aagatcgaacagatcaagcatgacctgcgtaagctgaccgtggggtcggtggaatctgct
gtaggtattgaatacagcgtatcgcctgaagatagtggactctcccagggtgatccggtc
ggtgaaatgcaggtggggtccggcggaaagacagcagtgctcgatcagtacaccatcaat
ctgacgcagcttgcccgtcttggaaaggtcgatcctgtggtgggacgcgatgccgagatc
cggcaggcagtcgatatcctgctacgtcgcaggcagaacaatccgattctcaccggggaa
gccggtgtcggcaagaccgcggtggtcgaggggctggctctgagcattgtccgtggcgac
gtaccgcaggctcttcaaggtgttgagatccacaccctggacatgggcttgctgcaggcc
ggcgccagcgtcaaaggtgaattcgaaaaccgtctcaagaacgtgatcgatgcagtaaag
agcagcccgcatcctattattctcttcatcgacgaggcccataccatgatcggtgcgggt
ggacaggccggccagaacgatgccgccaatctgctcaagccggccctggcacgcggcgag
ttgcgcaccatcgccgcgacgacctggactgagtacaagaagtatttcgagaaggatgcc
gcactggcgcggcgcttccaggtcatcaagatcgaggagcccaatgaggaaacagcctgt
gccatgctgcgggcaatggtgcccttgatggaagggcacttcggcgtccgcatctatgac
gaggctgtcaaggaagccgtgcgactttcccaccgttacatcaccggtcagcaactcccg
gacaaggcggtgagcgtgcttgataccgcctgcgccagggttgcgctggggcagagcgcc
acgccgccgtcgctgggggacctgaaacgacggctggaagagatcgatgccgaaatgctt
gcccttgaacgcgaggtggccattgatatcgcccatgaggcgaggttgacccaattgagt
cggcagcgtgtggcgacgctggcccatctggaggcattgaaggcccgttggcagcgggaa
cgtgagctcaatgagcacatacagaatgttcgcgcgacgctggagatgcagacgcaggaa
ggtagtccgggccaggaccccgcccaggcgcgcgccgagctgcgacagctaatggatgaa
ctcaggctgtatcagggtgagacgccgctgctgcccgtgcaggtcgacggccagatagtg
gcggagatcgtctccggctggactggcatcccgctgggcaagatggtcaaggacgagatc
aagaccgtactcggcctggatgccttgcttcaggagcgtgtgcttggtcagcgacatgcg
accgatgccgtggctcagcgggtgcgtacctcccgggccaatctggatgatccgggcaag
cccaagggcgtctttctctttgttggtccttccggcgtaggcaagaccgagaccgccctt
acgctggccgacgtgttatatggcggcgagcgcaagcttatcaccatcaacatgagcgag
tatcaggaggcgcatacggtctcgggactcaagggctcgcctcccggctatgtgggttac
ggcgagggtggcgtgctgaccgaggcggtacgtcgcaacccttacagcgtggtcttgctt
gatgaagtggagaaggcccatccggatgtgctggaactcttcttccaggtcttcgataag
ggtgtattggacgacggtgaggggcgtcagatcgacttcaggaactgcatcatcattctg
accagcaatgtcgcctctgcgcagatgatgcaggcttgcctgaacaaggtcagcgacgag
ctgcccactcctgatgaacttgacgccctgatccggccgcagttggtcagggccttcaag
ccagccttcctcgggcggctgaaggtgattccgtattacccgatcgctgatgacatattg
gtgaagatcatcgagctcaagctctcgcgcatcgccaagcgcattgaagcgaatcacaag
gccgaattcgtctacgacaagaccctggtggatgccgtgttggcccgttgtacggaggtc
gattccggcgcgcgcaatgtggacaatatccttaacggcagcctgctgcccgagatcgct
gggagcgtgctggcacgcatggccgaagcgcagggcatcagtcgtatcaaggtgtcggcc
agcaagaaaggcgttttcaagtacgtcatccagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (29)   

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