KEGG   Heterocephalus glaber (naked mole-rat): 101707353
Entry
101707353         CDS       T02812                                 
Symbol
Chd4
Name
(RefSeq) chromodomain helicase DNA binding protein 4
  KO
K11643  chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Pathway
hgl03082  ATP-dependent chromatin remodeling
hgl05165  Human papillomavirus infection
hgl05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    101707353 (Chd4)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    101707353 (Chd4)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    101707353 (Chd4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hgl03036]
    101707353 (Chd4)
Chromosome and associated proteins [BR:hgl03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    101707353 (Chd4)
  Chromatin remodeling factors
   NuRD complex
    101707353 (Chd4)
SSDB
Motif
Pfam: SNF2-rel_dom CHDCT2 CHDII_SANT-like Helicase_C CHDNT DUF1087 PHD Chromo ResIII HDA2-3 PHD_2 DEAD
Other DBs
NCBI-GeneID: 101707353
NCBI-ProteinID: XP_012922765
Position
Un
AA seq 1913 aa
MASGLGSPSPCSAGSEEEDMDALLNNSLPPPHPENEEDPEEDLSETETPKLKKKKKPKKP
RDPKIPKSKRQKKERLLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKL
GPKKEKKSKSKRKEEEEEEDDDDDSKEPKTSAQLLEDWGMEDIDHVFSEEDYRTLTNYKA
FSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESM
VTATEVAPPPPPVEVPIRKAKTKEGKGPNARRKPKGSPRVPDAKKPKPKKVAPLKIKLGG
FGSKRKRSSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLRTTKKKKKGEEEVT
AVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ
WEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPL
PEIPNGEWLCPRCTCPALKGKVQKILIWKWGQPPSPTPVPRPPDADPSTPSPKPLEGRPE
RQFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKN
KDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVE
IQDYDLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLD
ATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLV
SAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKE
ASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLL
TGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKA
DVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCN
HPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLD
LLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADT
VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVR
PGLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDR
NQDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRH
HYEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDEDFDER
SEAPRRPSRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMPPQDAFT
TQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMS
LIRKKVQEFEHVNGRWSMPELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPAPPA
EDGIKIEENSLKEEESTEGEKEVKLAASEATVECAQPPAPASEDEKVLVEPLEGEDKVEK
AEAKERTEEPMETESKGVADVEKVEEKSAIDLTPIVVEDKEEKKEEEDKKEVMLQNGETP
KDLSDEKQKKNIKQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAG
IINHGYARWQDIQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEEQLR
RAAYLNMSEDPSHPSMALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKGILKQLEE
LLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLANRAPEPPPQQVAQQQ
NT seq 5742 nt   +upstreamnt  +downstreamnt
atggcgtcgggcctgggctccccgtccccctgctcggcgggcagcgaggaggaggacatg
gatgcacttttgaacaacagcctgcccccaccccacccagaaaacgaagaggacccagaa
gaagatttatcagaaacagagactccaaagctcaagaagaagaagaagcctaaaaaacct
cgggaccctaagatccctaagagcaagcgccaaaaaaaggagcgtttgctcttatgccgg
cagctgggggacagctctggggaggggccagaatttgtggaggaggaggaagaggtggct
ctgcgctcagacagtgagggcagtgactatacccctggcaagaagaagaagaagaaactt
ggacctaagaaagagaagaagagcaaatccaagcggaaggaggaggaggaggaggaggat
gatgatgatgattcaaaggagcctaaaacgtctgctcagctcctggaagactggggcatg
gaagacatcgaccatgtgttctcggaggaggattatcgcacccttaccaactacaaggcc
ttcagccagtttgtccgacccctcattgctgccaaaaaccccaagattgctgtctccaag
atgatgatggttttgggtgcaaagtggcgggaattcagtaccaacaaccccttcaaaggc
agctctggggcttcagtggcagcggcggcagcggcggcagtggctgtggtggagagcatg
gtgacagccactgaggtggcacccccgcctccccctgtagaggtgcccatccgaaaggcc
aagaccaaggagggtaaaggacccaatgctcggaggaagcccaagggcagccctcgtgta
cctgatgccaagaagcccaaacccaagaaagtagctcccctgaaaatcaagctgggaggc
tttggttcgaagcggaaaagatcctcgagtgaggatgatgacttagatgtggaatctgac
ttcgatgatgccagtatcaatagctattctgtttctgatggttccaccagccgcagtagc
cgcagccgcaagaaactccggaccactaaaaagaaaaagaaaggcgaggaggaggtgact
gctgtggatggttatgagacagaccaccaggactattgcgaggtgtgccagcaaggtggc
gagatcatcctgtgcgatacctgtcctcgagcctaccacatggtgtgcctggacccggac
atggagaaggcccctgagggcaagtggagctgcccgcactgcgagaaggagggcatccag
tgggaggcgaaagaagacaactctgagggcgaggagatcctggaagaggtcgggggagac
cctgaagaggaggacgaccaccatatggagttctgtcgggtctgcaaggacgggggggag
ctgctctgctgtgacacctgcccttcctcctaccacatccactgcctgaaccccccgctg
ccagagatccccaatggcgaatggctctgtccccgatgcacttgtccagctctgaaaggc
aaagtgcagaagatcctaatctggaagtggggtcagccgccatcccccacgccagtgcct
cggcctccagatgcagaccccagtacaccctcccccaagcccttggaggggcggccggag
cggcagttctttgtgaaatggcaaggcatgtcctactggcactgctcctgggtgtctgag
ctgcagttggagcttcattgtcaggtgatgttccgaaactatcagcggaagaatgatatg
gatgagccaccttctggggactttggtggtgatgaagagaagagccgaaagcgaaagaac
aaggaccctaagtttgcagagatggaggaacgtttttatcgctatggtataaagcctgaa
tggatgatgatccatcgaatcctcaatcacagtgtggacaagaagggccacgtccactac
ttgatcaagtggcgagacttaccttatgatcaggcatcttgggagagtgaagatgttgag
atacaggactatgacctgtttaagcagagctactggaatcacagggaattaatgagaggc
gaggaaggacgaccaggcaagaagctcaagaaggtgaagctgaggaagttggagaggcct
cctgagactccaactgttgatccaacagtgaagtatgagcggcagccggagtacctggat
gccacaggcgggaccctgcacccctaccaaatggagggcctgaactggctgcggttctcc
tgggctcagggcactgacaccatcctggctgacgagatgggcctggggaaaactgtgcag
acggcagtcttcctctactccctctacaaggagggtcattcgaagggccccttcctagtg
agtgcccctctttctacaatcatcaactgggagcgggagtttgagatgtgggctcccgac
atgtatgtggtgacctatgtgggggacaaggacagccgcgccatcatccgggagaatgag
ttctcctttgaagacaatgccattcgtggtggcaagaaggcatcccgcatgaagaaagag
gcgtctgtgaaattccatgtgctgctgacgtcctatgagctgatcactattgacatggct
atcctgggttccattgactgggcctgcctcattgtggatgaagcccatcggctgaagaac
aatcagtctaagttcttccgggtcctgaatggctactcgctccagcacaagctgctgctg
actgggactccgctgcagaacaatctagaagagctgtttcatctgctcaacttcctcacc
ccagagaggttccataatttggaaggcttcttggaggagtttgctgacattgccaaagag
gaccagattaaaaaactgcatgacatgcttgggcctcacatgctgcggcggctcaaagct
gatgtgttcaagaatatgccatccaagaccgagctgattgtgcgagtggagctgagccct
atgcagaagaagtactacaagtacatcctcacacggaattttgaagcactcaatgctcga
ggtggtggcaaccaagtgtctctgcttaatgtggtgatggatctgaagaagtgctgcaac
catccatacctcttccctgtggcagccatggaagctcctaagatgcctaatggcatgtat
gatggcagtgccctgatcagagcatctgggaagttattgctgctgcagaagatgcttaag
aaccttaaggagggtgggcatcgtgtactcatcttctcccagatgaccaagatgttagac
ttgctagaggatttcttggaacatgaaggctataaatatgaacgtattgatggtggaatc
actggtaacatgcgtcaagaggccattgaccgcttcaatgcacctggggcccagcagttc
tgcttcttgctttctactcgagctgggggcctcgggatcaatctggccactgctgataca
gttattatatatgactctgactggaacccccacaacgacatccaggccttcagcagagct
catcgtattggacaaaataagaaggtgatgatctaccgatttgtgacccgtgcgtcagtg
gaggagcggataacacaggtggcaaagaaaaagatgatgctgacacatctggtagtgcgg
cccgggctgggctccaagactgggtccatgtccaagcaggagcttgatgatatcctcaaa
tttggtactgaggagctattcaaggatgaagccacagacggaggaggagacaacaaagag
ggagaagatagcagcgttatccattatgatgataaggccattgaacggctgctggaccgc
aaccaggatgagactgaagacacagaattgcagggcatgaatgaatatttgagctcattc
aaagtggctcagtatgtggtgcgagaagaagaaatgggggaggaagaagaggtagaacgg
gaaatcataaaacaagaagaaagtgtggatcctgactactgggagaaattgctgcggcac
cattatgagcagcagcaagaagatctagcccgaaatctgggtaaaggaaaaagaatccgt
aaacaggtcaactacaatgatggctcccaggaggaccgagattggcaggacgaccagtcc
gacaaccagtccgattactcagtggcctcagaggaaggtgatgaagactttgatgaacgc
tcagaagctccccgcaggcccagtcgcaagggcctgcggaatgataaagataagccattg
cctcctctgttggcccgtgttggtgggaatattgaagtacttggttttaatgctcgtcag
agaaaagcttttcttaatgcaattatgcgatatgggatgccacctcaggatgcttttact
actcagtggcttgtgagagatcttcgaggcaagtcagaaaaagagttcaaggcttatgtg
tctctctttatgaggcatttatgtgagcctggagcagatggagcagagactttcgctgat
ggtgtcccccgagaaggcctgtctcgccagcacgtccttactaggatcggtgtcatgtcc
ttgattcgcaagaaggttcaggagtttgagcatgttaatgggcgctggagcatgcctgaa
ctggctgaagtagaggaaaacaagaaaatgtcacaaccagggtcgccctctccaaagact
cctacaccctccactccaggggacacacaacccaatactcctgcacctgccccacctgct
gaagatgggataaaaatagaagaaaatagcctcaaagaagaagagagcacagaaggggaa
aaggaagtcaaattggctgcctctgaggccaccgttgagtgtgcacagccccctgcccct
gcctcagaggatgaaaaggtccttgttgaaccccttgagggcgaggacaaagtggagaaa
gcagaggcgaaggagagaacagaggaacctatggagacagaatccaaaggtgttgctgat
gtggagaaggtagaggagaagtcagcaatagatctgacccctatcgtggtagaggacaaa
gaagagaagaaagaggaagaagacaaaaaagaggtgatgcttcagaatggagagactccc
aaggacctgagtgatgagaagcagaagaaaaatatcaaacagcgtttcatgttcaacatt
gcagatggcggttttactgagttgcactccctgtggcagaatgaggagcgggcagccaca
gtcaccaagaaaacttatgagatctggcatcgacgacatgactactggctgttagctggc
atcataaaccatggctatgcccggtggcaggacatccagaatgatccccgctatgccatc
ctcaatgaacctttcaaaggtgaaatgaaccgtgggaatttcttagagatcaagaataag
tttctagctcgaaggttcaagctcttagaacaagccctggtgattgaggagcagctgcgc
agggcggcttacctgaacatgtcagaggacccttctcacccttccatggccctcaacact
cgttttgctgaggtggagtgtttggcggaaagtcaccagcatctgtccaaggagtcgatg
gcaggcaacaagccagccaatgcagtcctgcacaaaggtattctgaaacagctggaagag
ctgctgagtgacatgaaagctgatgtgacgcgactcccagctaccattgcccgaattcct
ccagttgctgtgaggttacagatgtccgagcggaacattctcagccgcctggcaaaccgg
gcaccggagcctcccccacagcaggttgcccagcagcagtga

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