KEGG   Heterocephalus glaber (naked mole-rat): 101713712
Entry
101713712         CDS       T02812                                 
Symbol
Kdm2a
Name
(RefSeq) lysine demethylase 2A
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Pathway
hgl03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    101713712 (Kdm2a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hgl03000]
    101713712 (Kdm2a)
   04121 Ubiquitin system [BR:hgl04121]
    101713712 (Kdm2a)
   03036 Chromosome and associated proteins [BR:hgl03036]
    101713712 (Kdm2a)
Enzymes [BR:hgl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     101713712 (Kdm2a)
Transcription factors [BR:hgl03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    101713712 (Kdm2a)
Ubiquitin system [BR:hgl04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     101713712 (Kdm2a)
Chromosome and associated proteins [BR:hgl03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    101713712 (Kdm2a)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     101713712 (Kdm2a)
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like F-box JmjC Cupin_8 LRR_4 Cupin_1
Other DBs
NCBI-GeneID: 101713712
NCBI-ProteinID: XP_012930184
Position
Un
AA seq 1155 aa
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGR
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITSRSHLTKEFQKESLS
MDMELNGLESGNGDEEGVDREPRRLSSRRSVLTSPVANGVNLDYDSLGKTCRSLPNLKKT
LSGDSSSDCSRGSHNGQVWDPQCSPQKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKILLEELASSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDSSEKAQKRKMEENDEEAVQAKVLRPLRSCDEPLTPPPHSPT
SMLQLIHDPASPRGMVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNP
SGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRVLVQHC
PARTPQRGDEEGLGGEEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMS
VFRYLSRRELCECMRVCKTWYKCKSADSVEGHGSSLPISLKIHSLCSGQLIIDTLNGLVE
YIPYLFPFIAGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPSA
DKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQSSNLLTA
VGSSTRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEHFISDLSIN
SLYCLSDEKLIQKIS
NT seq 3468 nt   +upstreamnt  +downstreamnt
atggaacccgaagaagaaagaattcgttacagccagagattgcgtggtaccatgcgacga
cgctatgaagacgatggcatttcagatgatgaaattgaagggaaaagaacttttgacttg
gaagagaaactccacaccaacaaatataatgccaattttgttacatttatggaaggaaga
gattttaatgtagagtatatccagcggggtggcttgagagaccctctgatattcaagaat
tctgatggacttggaataaagatgccagatccagactttactgtgaatgatgtcaaaatg
tgtgtaggaagtcgtcggatggtggatgtcatggatgtgaatacacagaaaggcattgaa
atgaccatggctcagtggacacgctactatgagactccagaggaagagcgagaaaaactc
tataatgtcatcagcctagagtttagccacaccaggctggagaacatggtacagaggcct
tcaacggtggatttcattgactgggtagacaacatgtggccaaggcatttgaaggaaagt
cagactgaatcaacaaatgccatcttggaaatgcagtaccctaaagtgcagaagtactgt
ttaatgagtgttcgaggctgctatactgactttcacgtggactttggtggtacctctgtg
tggtatcacatccaccaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaattggctgctatcagggaaacagggagacatctttctgggtgac
cgggtgtcagattgccaacgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgctgtatatactcctacagacacattggtctttggaggcaattttttg
catagcttcaacatccccatgcaattaaagatatataacattgaagatcggacacgggtt
ccaaataagttccgctatccattttactatgagatgtgttggtatgtgttggagcgctac
gtgtactgtataaccagccgttcccacctaactaaggaatttcagaaagaatctctcagc
atggatatggagttaaatggattggagtctggaaatggggatgaggaaggagtagaccga
gaaccccgacgtttgagcagtaggcgttctgtccttactagccctgtagccaatggggtc
aacctggattatgacagcctgggaaaaacctgccgaagtcttccgaatctgaagaaaact
ttgtctggggactcatcctctgactgtagccggggctcccataatggccaagtgtgggat
ccccagtgtagcccccaaaaggacaggcaagtgcatctgacccattttgagcttgaaggc
cttcgctgccttgtagataagttggaatctctgccactgcacaagaagtgtgtccccaca
gggatagaagatgaagatgctcttattgccgatgtgaagattttgcttgaggagcttgcc
agtagcgatcccaagttagccctcactggagtccctatagtacagtggccaaaaagggat
aagcttaaattccccacccggccaaaggtgcgggttccaaccatccctatcacaaagcct
cacactatgaaaccagctccacggctaacacctgtgaggcctgcggctgcctctcccatt
gtgtcaggagccaggcgaagaagagtgcgctgtcggaaatgcaaagcctgtgtgcaagga
gagtgcggtgtttgccactactgcagggacatgaagaagtttggaggacctggacgcatg
aaacagtcctgtgtcctccgacagtgcttggcacccagactgcctcactcagtcacatgt
tccctctgtggagaggtggatcagaatgaagagacacaggactttgaaaagaaacttatg
gaatgctgtatctgcaatgagattgttcaccctggctgccttcagatggatggagagggt
ttgcttaatgaggaattgccaaattgctgggagtgtccaaagtgttatcaagaggacagc
tcggagaaagctcagaagcggaaaatggaagagaatgacgaagaagctgtgcaagccaaa
gtcctgcggcccctgcggagctgcgatgagcccctcacacccccgccccattcacccact
tccatgctgcagctcatccacgacccagcttccccccggggtatggtgactcggtcatcc
cctggggctggccccagcgatcaccacagtgccagccgtgatgagcgcttcaaacggcgg
cagttgctgcggctgcaggccacagagcgcaccatggtacgggaaaaggagaacaatccc
agcggcaaaaaggagctgtctgaagttgagaaagccaagatccggggatcgtacctcact
gtcacgctacagaggcccaccaaagagctccacgggacatccattgtgcccaagctgcag
gccatcacggcctcctctgccaatcttcgccattccccccgtgtgctagtgcagcactgt
ccagcccgaaccccccaacgtggggatgaggaggggctggggggagaggaggaggaagag
gaggaggaggaggaggaagatgacagtgcagaggaggggggtgcagccaggctgaatggc
cggggcagttgggctcaggatggagacgaaagctggatgcagcgggaggtctggatgtct
gtcttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgcaagacgtgg
tataaatgtaaaagtgcagattctgtggaaggacatggttcctctctccccattagcttg
aaaatacattcactttgttctggtcagctgataattgacactttgaatgggctagtagag
tacattccatatctgtttccattcattgcaggactgaaagacctcctcctagcaggctgt
tcctggtctgcagtctctgccctcagcacctccagctgcccccttctcaggacccttgat
cttcggtgggcagtgggaattaaggaccctcaaattcgggacttgctgactccatcagct
gataaaccaggtcaggacaatcgcagcaagctccggaacatgactgacttccggctggca
ggccttgacatcacggatgccacacttcgcctcatcattcgccacatgcccctcctgtct
cgactcgacctcagtcactgcagccaccttacagatcagtcctccaatctactcaccgct
gttgggtcttccactcgttactctctcacagaactcaatatggcaggttgcaataaactg
acagaccagaccctgatctacctacggcgcattgccaatgtcaccctgattgaccttcga
ggatgcaagcagatcactcgaaaagcctgtgagcacttcatctcagacttgtccatcaat
agcctctactgcctgtctgatgagaagctgatacagaagattagctaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (58)   

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