KEGG   Heterocephalus glaber (naked mole-rat): 101717614
Entry
101717614         CDS       T02812                                 
Symbol
Utp4, Cirhin, Cirh1a
Name
(RefSeq) UTP4, small subunit processome component
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Pathway
hgl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101717614 (Utp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hgl03009]
    101717614 (Utp4)
Ribosome biogenesis [BR:hgl03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    101717614 (Utp4)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 PROPPIN PQQ_2 Frtz
Other DBs
NCBI-GeneID: 101717614
NCBI-ProteinID: XP_004843014
UniProt: G5AK50
Position
Un
AA seq 686 aa
MGEFKVHRVRFFNYVPPGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHES
RATEALCWAEGQRLFSAGLNGEILEYDLQALNIKYAMDAFGGPIWSMIASPSGSQLLVGC
EDGSVKLFQITPDKIQFERNFDPQKSRVLSLSWHPSGTHIAAGSIDYISVFDVKSGSAIH
KMIVDRQYMGVSKRKCIVWGVAFLSDGTVISVDSAGKVQFWDSATGTLVKSHLIANADVQ
SIAVADQEDSFVVGTAEGTVFHFQLVSVTSNSTEKQWVRTKPFQHHTHDVRTVAHSPTAL
ISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRRLISCSRKRQLLLFQFAHHLELWRL
GSTAATGKNGDILPLSKNADHLLHLKTKGPENIICSSISPCGSWIAYSTASRVFLYRLNY
EHDNISLQRISKMPAFLRSALQILFSEDSTKLFVASNQGSLHIIRLLEGSFKHLHTFQPQ
SGTVEAMCLLAVSPDGNWLAASGTSAGVHVYNVKHLKLHCTVPAYNFPVTALAIAPNTNN
LVIAHSDQQVFEYSIPDKQYTEWSRNVQKQGFHHLWLQRDTPITHISFHPKRPMHILLHD
AYMFCIIDKSLPLPNDKTVLYNPLPPTNESDVFRRRTGHAFKISKIYKPLLFMDLLDEGT
LVAVERPLDDIIAQLPPPIKKKKFGT
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgggtgaattcaaagtccatcgagtacgtttctttaattatgtcccaccagggattcgc
tgtgtggcttacaataaccagtcaaatagattggctgtttcacggacagatggcactgtg
gaaatttataatttgtcagcaaactactttcaggagaaatttttcccaggtcatgaatct
cgtgctacagaagctctgtgttgggcagaagggcagcgactctttagtgctggactcaat
ggagaaattcttgagtatgacttacaggcattaaacatcaaatatgctatggatgccttt
ggcggacccatttggagtatgattgccagccccagtggctctcaacttttggttggctgt
gaagatggatctgtgaaactgtttcaaatcacccctgacaaaatccagtttgaaagaaat
tttgatccgcagaaaagtcgcgtcctgagtctcagctggcatccctctggtacccacatt
gcagcaggctccatagactacattagtgtgtttgatgtcaaatcaggcagtgctattcat
aagatgatcgtagataggcaatacatgggtgtgtctaagcggaagtgcattgtgtggggt
gtggccttcttatctgatggcacggttataagtgtggactctgctgggaaagtgcagttc
tgggattcggctacagggacgcttgtcaagagccatctcatcgcaaatgctgatgtacag
tccattgctgttgctgatcaagaagacagttttgtggtgggcactgctgaaggcacagta
ttccattttcagctggtctctgtgacttccaacagtactgagaagcagtgggtgcggacc
aaaccattccagcaccatacccatgacgtgcgcactgtggcccacagcccaacagcactg
atatctggaggcacggacacccacttagtcattcgccctctcatggagaaggtggaggta
aagaactatgatgctgctctccgaaaaatcacctttccccatcggcgactcatttcctgt
tctagaaagaggcagcttctcctcttccagtttgctcatcacttggaactttggcgactg
ggatctacagctgcaacaggcaagaatggggatatccttccactttctaaaaatgctgat
catttactgcacctcaagacaaagggccctgagaacattatttgcagctctatctcccca
tgtggaagctggatagcctactctacagcatctcgggtttttctctatcggttgaattat
gaacatgacaacataagcctccagaggatttccaaaatgccagcattccttcgctctgcc
cttcagattttgttttctgaagattcaacaaagctctttgtggcatcaaatcaggggtct
ttacatattattcggctattggaaggcagcttcaagcacctgcatacttttcagcctcag
tcagggacagtggaggccatgtgtcttttggcagtcagtccagatgggaattggctggct
gcatcaggtaccagtgctggagtccatgtatacaatgtaaaacatctaaagcttcactgc
acggtgcctgcttacaattttccagtgactgctctggccattgctcccaataccaacaac
cttgtcattgctcattctgaccaacaggtatttgagtacagcatcccagacaaacagtat
acagagtggagccggaatgtccagaagcaggggtttcaccatctttggctccaaagggat
acacccatcacacacatcagttttcatcccaagcgaccaatgcacatcctcctccatgat
gcctacatgttctgcatcattgacaagtcattgcctcttccgaatgataaaacagtactt
tacaatccacttcctcctacgaatgaatcagatgtcttccggaggcggacaggccatgcc
tttaaaatttctaagatatataagcccttactcttcatggatcttttggatgaagggaca
cttgtggcagtagaacgaccccttgatgatattatcgctcagctcccaccacccatcaaa
aagaagaaatttggaacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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