KEGG   Heterocephalus glaber (naked mole-rat): 101726331
Entry
101726331         CDS       T02812                                 
Symbol
Supt5h
Name
(RefSeq) SPT5 homolog, DSIF elongation factor subunit
  KO
K15172  transcription elongation factor SPT5
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Pathway
hgl03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    101726331 (Supt5h)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hgl03021]
    101726331 (Supt5h)
   03019 Messenger RNA biogenesis [BR:hgl03019]
    101726331 (Supt5h)
Transcription machinery [BR:hgl03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     101726331 (Supt5h)
  RNA polymerase I system
     101726331 (Supt5h)
Messenger RNA biogenesis [BR:hgl03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     101726331 (Supt5h)
SSDB
Motif
Pfam: KOW Spt5-NGN Spt5_N DUF3912
Other DBs
NCBI-GeneID: 101726331
NCBI-ProteinID: XP_004859170
Position
Un
AA seq 1087 aa
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSAAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKVLSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPRTVGVIVRLERETFQVLNMYGKVVTVRHQAVTQKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSDREGEIRHIYRNFAFLHCKKLVENGGMFVCKTRHLVLAGGLKPRDVTNFTVG
GFAPMSPRISSPMHPSGGGQHGGFGSPGGSGSGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMASNYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEA
NT seq 3264 nt   +upstreamnt  +downstreamnt
atgtcggacagcgaggacagcaacttctcggaggaggaggacagcgagcgcagcagtgat
ggcgaggaggccgaggtagaggaagagcggcggagtgcagcgggcagtgagaaggaagag
gagcctgaggaagaagaggaggaggaagaggaagaggaatacgatgaagaagaagaagag
gaagatgatgatcggccccccaaaaaaccccgacatggtggcttcattttggatgaggct
gatgtggacgatgagtatgaggacgaggaccagtgggaagacggagctgaggacatccta
gagaaagaagagattgaagcctccaatattgataatgttgtcctggatgaagaccgatct
ggggcccgccgcctgcagaacctctggagggaccagcgagaagaagagctgggagagtat
tacatgaagaaatatgccaagtcgtccgtgggagagacggtgtatggagggtctgacgag
ctctcggatgacatcacccagcagcagctgctcccaggagtcaaggatcccaacctgtgg
actgtcaaatgtaagattggggaggagcgagccacagccatttccttgatgcgaaagttc
atcgcctaccagttcacagacacgcccctgcagatcaagtccgtggtggcccccgagcat
gtgaagggctacatctatgtggaggcctacaagcagacccatgtgaagcaggccatcgag
ggtgtgggcaacctgcggctcggctactggaaccagcagatggtgcccatcaaggagatg
acagatgtgctcaaagtggttaaggaggtggccaacctgaagcccaagtcctgggtccgc
ctcaaacgaggcatctacaaggatgacatcgctcaggtggactacgtggaacccagccag
aacaccatctccctgaagatgatcccacgcattgactatgaccgtatcaaggcccgcatg
agcttgaaagactggtttgccaaaaggaagaagttcaagcgacctccacagagactcttt
gacgccgagaagatcaggtccctggggggcgatgttgcctctgatggtgacttcctcatc
tttgaggggaaccgctacagccggaagggcttcttgttcaagagcttcgccatgtctgct
gtgatcacggagggagtgaagcccacactgtctgagctagaaaagtttgaggaccagccg
gagggcattgacctggaggtggtgacagagagcacagggaaggagcgggagcacaacttc
cagcctggggacaatgtggaggtgtgtgagggcgagctcatcaatctacagggcaaggtt
ctcagcgtggatggcaacaagatcaccatcatgcccaagcatgaggacctcaaggacatg
ctggaattcccagcccaggagcttcgaaagtacttcaagatgggggaccatgtgaaggtg
atcgctggccgattcgagggtgacacgggcctcattgttcgagtggaggagaacttcgtc
atcctcttctccgacctcaccatgcacgagctgaaggtgctcccccgagacctgcagctc
tgctcagagacagcctcaggagtggatgttggtggccagcacgaatggggtgagctggtg
cagctggacccccggactgtgggtgtcatcgtgcgtctggagcgggagaccttccaggtg
ctgaacatgtatgggaaggtggtaactgtcaggcaccaggctgtgacccagaagaaggac
aaccgctttgctgtagccctggactcggagcaaaacaacatccacgtaaaagacattgtc
aaggtcattgacggcccccactcggaccgggagggtgagatccgccatatctaccggaac
ttcgccttcctgcactgcaagaagctggtggagaacggaggcatgtttgtctgcaagacc
cgccatctggtgctggccggggggttgaagccccgggatgtgaccaacttcaccgtgggt
ggctttgcacctatgagcccccggatcagcagccccatgcacccaagtggtggaggtcag
cacggtggctttggtagtccaggtgggagtggtagtggcatgagcaggggccgaggacgg
agagacaatgagctcattggccagactgtgcgcatctcccagggcccctacaaaggctac
attggcgtggtgaaggatgccacagagtccacggcccgtgtggagctgcactccacctgc
cagaccatctctgtggaccgccagcggcttaccacggtcggctctcggcgcccaggtggc
atggcctcaaactatggtcggacgcccatgtatggctcccagacgcccatgtatggctct
ggctcacgtactcccatgtatggctctcagacgcctctccaggatggcagccgtacccca
cattatggctcgcagacacccctgcatgatggcagccgtacccctgcccagagtggagcg
tgggaccccaacaaccccaacacaccatcacgggctgaggaagaatatgagtacgccttt
gatgatgagcctacgccgtccccccaggcctatgggggaacccctaacccgcaaacacct
ggctacccagacccctcatctccccaggtcaacccacagtataatccacagacaccaggg
acacccgccatgtacaacacagaccagttctctccctatgcggccccctctccacaaggc
tcctaccagcccagtcccagcccccagagctaccaccaggtggcacccagcccagcaggc
taccaaaacacccactctccagccagctaccaccccacaccctcgcccatggcctaccag
gcaagccccagcccaagcccagtgggctacagtccgatgacacccggagccccttcccct
ggtggctacaacccgcacacaccaggctcaggcattgagcagaactccagcgactgggta
accactgacatccaggtgaaggttcgggatacctacctggatacacaggtggtggggcag
actggcgtcatccgcagcgtcacgggaggcatgtgctctgtgtacctgaaggacagtgaa
aaggtcgtcagcatttccagtgagcacctggaacccattacccccaccaagaacaacaag
gtgaaggtgattctgggcgaggatcgggaagccacaggagtcctgctgagcatcgacggt
gaggatggcattgtccgaatggaccttgacgagcaactcaagatcctcaacctccgcttc
ctggggaagctcctggaggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (42)   

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