KEGG   Halobacterium hubeiense: Hhub_1801
Entry
Hhub_1801         CDS       T04202                                 
Symbol
rad50
Name
(GenBank) DNA double-strand break repair ATPase Rad50
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
hhb  Halobacterium hubeiense
Brite
KEGG Orthology (KO) [BR:hhb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhb03400]
    Hhub_1801 (rad50)
DNA repair and recombination proteins [BR:hhb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Hhub_1801 (rad50)
    Archaeal homologous recombinant proteins
     Hhub_1801 (rad50)
SSDB
Motif
Pfam: AAA_23 SMC_N AAA_15 AAA_13 AAA_21 AAA_29 DUF1664 AAA_27 ABC_ATPase MscS_porin CENP-F_leu_zip Mod_r Crescentin Phage_GP20 MukB COG6_N Uso1_p115_C ZnF_RZ-type ATG14 BLOC1_2 Snapin_Pallidin ABC_tran FapA TPR_MLP1_2
Other DBs
NCBI-ProteinID: CQH52040
UniProt: A0A0U5H2H5
Position
I:complement(747283..749946)
AA seq 887 aa
MRFTRVSLRNFKCYEDADVRLDRGVTVIHGLNGSGKSSLLEACFFALYGASALDKTLDEI
VTIGAEEAEIDLWFTHAGNDYHVHRRVRNTGERASTPDCTLETPSGSIDGVTDVEDYVGD
LLRMDAEAFVNCAYVRQGEVNKLINASPSTRQDMLDDLLQLGKLEDYRQRAGDARLGVED
VKSNVAGKLDQLDEQIEAKESENPHDTLASLQSELTDVTEEIENFEDQRETARETLEDAE
SVLEAYEEKRAELADVEETISDVREAIAETESEREELADEIAEHRERADDLEAEAEELVA
ETELDEADAEAAEAKREELAEEREAVTERVSEVAPEVSQFSTEADNAAERADDLEERAAD
LRAEADELESEADELDAEREEAVERIAELDEEVAEAKAAFEDAPVEFGNAEAHLESLNAD
LDDLRKRREGVRADLQSAEDRVEEAEQLLDAGKCPECGQPIEGSPHVESVEEYRERVADL
EAELETIEEDVEDVTERIDRAEGLVEREREVADLQRNRELAVERRDDRADAASEARADAE
AKREQADDLEAEAEGAREEAEEKREQAEDKREALAELNAEQSSLKERVERLADLVDVLAE
AADHRETADQLAEKRASLDDRNDERRDRLSDLRERKQSLEADFDEDRIEAAKEDKERAED
YLEQVEPKLEDLRERRDELQGQIGAAENAIEELEALREQRETVAARLDELQEIHDEVAEL
EATYGDLRAELRQQNVAKLERLLNETFELVYQNDSYARIELSGDYELTVYQKDGEPLEPE
QLSGGERALFNLSLRCAIYRLLAEGIDGEAPLPPLILDEPTVFLDSGHVSQLVELVEQMR
RMGVEQIVVVSHDDELVDAADDVVRVEKDATTNRSRVVRDAEEVLAD
NT seq 2664 nt   +upstreamnt  +downstreamnt
gtgaggttcacgcgcgtctccctgcggaacttcaagtgctacgaggacgcggacgtgcgc
ctcgaccgcggggtcacggtcatccacgggctgaacggcagcgggaagtccagcctgctg
gaggcgtgtttcttcgcgctgtacggcgcgtccgcgttagacaagacgctggacgaaatc
gtcaccatcggcgcggaggaagccgaaatcgacctctggttcacgcacgccggcaacgac
taccacgtccaccgccgcgtgcggaacaccggcgagcgcgcctcgacgccggactgcacg
ctcgaaacgccctctgggagcatcgacggcgtcaccgacgtcgaggactacgtcggcgac
ctgctgcggatggacgcggaggcgttcgtgaactgcgcgtacgtccggcagggcgaggtg
aacaagctcatcaacgcgtcgccgagcacccggcaggacatgctcgacgacctcctccaa
ctcgggaagctggaggactaccgccagcgcgccggcgacgcgcggctcggcgtggaggac
gtcaagagcaacgtcgcggggaagctcgaccagctggacgagcaaatcgaggccaaagaa
tccgagaatccccacgacacgctggcgagcctgcagtccgaactcacggacgtcaccgag
gaaatcgagaacttcgaggaccagcgcgagaccgcacgcgagacgctcgaagacgccgag
agcgtgctggaggcctacgaggagaagcgcgcggaactcgccgacgtggaggagacgatt
agcgacgtccgggaggcaatcgcggagaccgagagcgagcgcgaggagctcgccgacgaa
atcgccgagcaccgcgagcgggccgacgacctcgaagccgaggccgaggagctggtcgcg
gagaccgaactggacgaggccgacgccgaggccgcggaagcgaagcgcgaggaactcgcc
gaagagcgcgaggccgtcaccgagcgcgtctcagaggtcgcgcccgaggtctcgcagttc
tcgacggaggccgacaacgccgccgagcgcgccgacgacctcgaagaacgcgctgcggac
ctccgcgcggaggccgacgaactcgagagcgaggccgacgaactcgacgccgagcgcgag
gaggccgtcgagcgcatcgcggagctggacgaggaagtcgccgaggcgaaggcggccttc
gaggatgcacccgtggagttcgggaacgccgaggcgcacctcgaatccctgaacgcggac
ctcgacgacctccggaagcgccgggagggcgtgcgcgcggacctccagtccgcggaggac
cgcgtcgaggaggccgaacagctactggacgccgggaagtgcccggagtgcggccagcct
atcgaggggtcgccgcacgtcgagagcgtcgaggagtaccgcgagcgcgtcgcggacctc
gaagccgaactggagaccatcgaggaggacgtcgaggacgtcaccgagcgcatcgaccgc
gcggagggactcgtggagcgcgagcgcgaggtcgcggacctccagcgcaaccgcgagctg
gcggtcgagcgccgcgacgaccgcgcggacgccgcgagcgaagcgcgcgcggacgccgaa
gcgaagcgcgagcaggccgacgacctcgaagccgaggccgagggcgcccgcgaggaagcc
gaggaaaagcgcgagcaggccgaggacaaacgcgaggcgctcgcggagttgaacgccgag
cagtcgtcgctcaaggagcgcgtcgagcggctggcggacctcgtggacgtgctggcggag
gccgccgaccaccgcgagaccgccgaccagctcgcggagaagcgcgcgagccttgacgac
cgcaacgacgagcgccgcgaccgcctgagcgacctccgcgagcgcaagcagtcgctggaa
gccgacttcgacgaggaccgcatcgaggccgccaaggaagacaaggagcgcgccgaggac
tacctcgaacaggtcgaacccaagctcgaagacctccgcgagcgccgcgacgagctacag
gggcagattggcgcggcggagaacgctatcgaggaactggaggccctgcgcgagcagcgc
gagacggtggccgcgcgcctcgacgagctacaggagattcacgacgaggtcgccgagctg
gaggcgacgtacggagacctgcgcgcggagctgcgccagcagaacgtcgcgaaactggag
cgcctgctgaacgagacgttcgaactggtctaccagaacgactcgtacgcccgcatcgag
ctctccggggactacgagctcaccgtctaccagaaggacggcgagccgctggaacccgag
cagctctccgggggcgagcgcgcgctgttcaacctcagcctgcggtgtgccatctaccgc
ctactcgcggagggcatcgacggcgaggcgccgctcccgccgctcatcctcgacgagccc
accgtcttcctcgactcggggcacgtctcccagctcgtcgaactggtcgagcagatgcgc
cggatgggcgtcgagcaaatcgtcgtggtgagccacgacgacgaactcgtggacgccgcc
gacgacgtggttcgcgtggagaaggacgcgacaacaaatcgctcccgcgtggtgcgggac
gccgaggaagtgctggcggactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (31)   

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