KEGG   Halobacterium hubeiense: Hhub_6068
Entry
Hhub_6068         CDS       T04202                                 
Symbol
tfbA10
Name
(GenBank) transcription initiation factor TFB
  KO
K03124  transcription initiation factor TFIIB
Organism
hhb  Halobacterium hubeiense
Pathway
hhb03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hhb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Hhub_6068 (tfbA10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hhb03021]
    Hhub_6068 (tfbA10)
Transcription machinery [BR:hhb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     Hhub_6068 (tfbA10)
 Prokaryotic type
  Archaeal type
    TFB
     Hhub_6068 (tfbA10)
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon OrfB_Zn_ribbon LysW-like_globular Ribosomal_S27e Cyclin_C DZR FtrD-like IBR C1_1 Zn_Tnp_IS91 zf_Rg PADR1_Zn_ribbon
Other DBs
NCBI-ProteinID: CQH65144
UniProt: A0A0U5D365
Position
pSTJ003:59091..60020
AA seq 309 aa
MTEPQENRSPKDRTNCPECGGQIRYNNSQSEVACQQCGLVIEEETIDHGPEWRSFTDEQR
QKKSRVGAPTTPLMHDKGLSTTISWQDKDARGQHLSSRKRERLRRLRRWDERFRTKDAAE
RNLKQAFDEIDRMASALGLPEAVRETAGVLYRCAVEEGLLPGRSIEGMATAALYASARQH
QTPRSPFVVETVSRVEKKRFQRAYRYLSRELKLEIEPESPDQHLPRLASTLDVTDEALRR
ARDLLDVAQQNGIHSGKSPVGMAASALYAATYLTNEKLTQETVSSAASVSKVTIRTRYQE
LLDVYAEHK
NT seq 930 nt   +upstreamnt  +downstreamnt
atgacggaaccacaagaaaaccgcagtccaaaagatcgaacaaattgcccggagtgtggg
ggacagattcggtacaataattcacagagtgaggtagcatgtcaacagtgtgggttggtc
atcgaagaggaaactatcgaccatgggccagagtggcggtcgtttactgacgaacaacgc
cagaaaaagagccgagtcggcgcaccgacgacgccactgatgcacgataagggactcagc
acgactatcagctggcaggacaaggatgcgcgcggccaacatctgtcaagcagaaaacgg
gagcgactacgacggctccgccggtgggacgaacgattccgcacgaaagatgccgcagag
cggaacctcaaacaggcattcgacgagattgatcggatggcgtcggcactgggcttgcct
gaggcagtccgtgagacagcgggggtcctctatcggtgtgccgtcgaggaagggttactt
ccgggtcgttctatcgaagggatggcaacggctgcactgtacgcgagcgcgcggcaacat
caaacaccgagatctccgttcgtagtcgagacggtaagcagagtcgaaaagaaacgcttt
cagcgggcataccggtatctctctcgggagctcaagcttgaaatcgaaccggaatctccg
gaccagcatctaccgcggctcgcatcaacacttgacgtaactgacgaggcacttcgccgt
gcgcgagacctgctcgacgttgcccagcagaacggcatccatagtggcaaaagcccggtc
ggaatggcggcatcagcgctgtatgcggcgacgtatttgacgaacgagaaactcacccag
gagaccgtgagttcagcggcaagcgtgagcaaggtcacgattcgaactcgctatcaggaa
ctgttggacgtatacgctgagcacaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (21)   

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