KEGG   Ectothiorhodospira haloalkaliphila: M911_05430
Entry
M911_05430        CDS       T03059                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
hhc  Ectothiorhodospira haloalkaliphila
Pathway
hhc03030  DNA replication
hhc03430  Mismatch repair
hhc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hhc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    M911_05430
   03430 Mismatch repair
    M911_05430
   03440 Homologous recombination
    M911_05430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hhc03032]
    M911_05430
   03400 DNA repair and recombination proteins [BR:hhc03400]
    M911_05430
Enzymes [BR:hhc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     M911_05430
DNA replication proteins [BR:hhc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     M911_05430
DNA repair and recombination proteins [BR:hhc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     M911_05430
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 DNA_pol_IIIA_C tRNA_anti-codon tRNA_anti_2 HHH_3
Other DBs
NCBI-ProteinID: AHK78705
UniProt: W8L477
Position
1105638..1109177
AA seq 1179 aa
MTPSFVHLHLHSEFSLVDGLVRVGALVDTARANGMPACAVTDQNNLFGMVKFYKAALKAG
VKPLIGADAWVTAPQPGEPPTRLVLLCQDNEGYGNLTRLISRGYQEGQQSGAPILERDWF
TPETCRGLIALSGAREGEVGRALLSSQPDMAPPLCDHWAGLFPGRFYLELVRTGREGEED
YLHAAVELAATRGLPVVATNDVRFLKAEDFDAHEARVCIHDGRVLDDPRRPRLYSRQQYL
RTPEEMAELFSDVPEALENTVEIARRCNLTLTLGENYLPQFPIPDGMTTDEYFRSESRKG
LEQRLVRLVAEDDPDREARIQTYKDRLEVELDVICQMGFPGYFLIVADFIQWAKDNGVPV
GPGRGSGAGSLVAYALKITDLDPIRYELLFERFLNPERVSMPDFDVDFCMEKRDSVIEYV
ARRYGREKVSQIITYGTMAAKAVVRDVGRVLGHPYGFVDRIAKQIPMEIGMTLDKALEQE
EDLRQSYQDDEEVRDLIDLALKLEGVARNAGKHAGGVVIAPTTLTDFSPLFCEPGGQGVV
THFDKDDVEAIGLVKFDFLGLRTLTIIDWAVHNINARRRENGEDLLDINDVSLEDPDTFS
LLKRQETTAVFQLESRGMKDLIKRLEPDDFEDIIALVALYRPGPLQSGMVDDYINRKHGR
AKVEYPHPALEPILKPTHGVILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKPEEMAKQ
REIFQKGAVEQGVEADTATYIFDLMEKFAGYGFNKSHSAAYALLSYQTAWLKCHYPAAFM
AAVLSADMDHTDKIVNLIDECRSMNLEVIPPDVNASSYEFTVRDARTIVYGLGAIKGVGE
SAIQVILDSRNQGGSFSSLDDLCMRADSQKINRRTLEALIRAGALDSIGPNRATLMHTLP
QALSRAEQYLRDQSMGQEDLFGDLVAPTPEVTATEQWPEWDEESRLLAEKETLGLYLTGH
PIIRYEAELAQITGKRIADLLSDLADSAPGNGGGNGGGNGEGGGYGRGRQREQTVIVAGL
VVAIRTRNGNSGRMAFLTLDDRSGRVEVGLFGDDYKRYQSLLVKDRLLVVEGSAGIDEFS
GNVRMRCRQIMDLDQAREQFAKRVELSVNGKASPGLLEGLHAHLEPFSEGPCPIYLSYCN
DQASARFRLGARWQVRPSEELIHRLRELLGEESVRIVYR
NT seq 3540 nt   +upstreamnt  +downstreamnt
atgacacccagttttgttcatctccatctgcattccgaattctccctggtggacggcctg
gtgcgcgtcggtgccctggtggataccgcgcgggccaacggcatgccggcctgtgcggtc
acggaccagaacaacctctttggcatggtcaagttctacaaggccgcgctcaaggccggg
gtgaagcccctcattggcgccgatgcctgggtgacggcaccgcagcctggagagccaccc
acgcgtctggtcctgctctgccaggacaacgaaggctatggaaacctcacgcgcctgatc
agccggggttatcaggaaggccagcaaagcggtgctcccatcctggagcgagactggttc
accccggagacctgtcgcggattgatcgccctgtccggcgcgcgcgagggggaagtgggt
cgcgccctgctgtccagccagccggacatggccccgcccctgtgcgatcactgggcaggg
ctttttccggggcgcttctacctggaactggtccgcaccgggcgagagggcgaggaggat
tacctgcacgcggcggtggaactggctgccacccgtggcctgccggtggtggccaccaac
gatgtgcgcttcctcaaggccgaggatttcgacgcccatgaggcccgtgtgtgcatccac
gatggccgggtgctggacgatccgagacggccacgtctgtacagtcggcagcagtatctg
cgcaccccggaagagatggcagagctcttcagcgatgtgccggaagcccttgaaaataca
gtggagatcgccaggcgctgcaacctcacgctgaccctgggggaaaactatctaccccag
ttccccatccctgacgggatgaccaccgacgagtattttcgcagtgagtcccgcaagggg
ctggagcagcgcctggtccgtctggtggccgaggatgatccggatcgggaggcccgcatc
cagacctacaaggaccgtctggaggtggagctggacgtgatctgccagatggggttcccc
ggctacttcctgatcgtggcggatttcatccagtgggccaaggacaacggcgtgccggtg
ggcccggggcgtggctccggggcgggctccctggtggcctatgccctgaagattaccgac
ctggatccaatacgttatgagcttctctttgagcgttttctgaatccggagcgggtgtcc
atgcccgacttcgatgtggacttctgcatggagaagcgggacagcgtcatcgagtacgtg
gcccgtcgttatggtcgggaaaaggtctcgcagatcatcacctacggcaccatggcggcc
aaggcggtggtgcgcgacgtcggcagggtcctgggacatccctacggctttgtggaccgg
atcgccaagcagatccccatggagatcggcatgaccctggacaaggccctggagcaggag
gaggacctgcgtcagagttaccaggatgacgaggaagtccgcgatctcatcgacctggcc
ctgaaacttgaaggggtggctcgcaatgccggcaagcacgctggcggcgtggtcatcgcc
cccaccacgctcacggacttctcgcccctgttctgcgagccgggcgggcagggggtggtc
acccacttcgacaaggacgatgtggaggccattggtctggtgaagttcgacttcctgggc
ctgcgcaccctgacgatcatcgattgggcggtgcacaacatcaatgcccggcgcagggaa
aacggcgaggatctgctggacatcaacgatgtctccctggaggacccggataccttcagc
ctgctcaagcgccaggagaccacagcggtcttccagctggaatcccggggcatgaaggat
ctcatcaagcgcctggaacccgatgattttgaagacatcatcgcgctggtggccctctac
cgccctggcccgctgcaatcgggcatggtggatgactacatcaaccgcaagcacggccgg
gccaaggtggaatacccccacccggccctggagcccatcctcaagcccacccatggggtg
atcctctaccaggaacaggtgatgcagatcgcccaggtgctggctggctacagcctgggc
ggcgctgacctgctgcgtcgagccatgggcaagaaaaagcccgaggagatggccaagcag
cgggagatcttccagaagggcgccgtggagcaaggggtggaggcggacaccgccacctac
atcttcgacctgatggagaagttcgccggttacggattcaacaaatcccactcggcggcc
tatgcgctgctctcctaccagactgcctggctcaaatgccattatccggcggccttcatg
gcggcggtgctctccgccgacatggatcacaccgacaagatcgtgaatctcatcgacgag
tgtcgttccatgaatctggaggtgatcccgccggacgtgaatgcctccagctacgagttc
accgtgcgcgatgcgcgcaccatcgtttacgggctgggcgccatcaagggcgtaggggaa
tcggccattcaggtgatcctggacagtcgtaaccagggcgggtcgttcagcagcctggat
gacctgtgcatgcgcgccgactcccagaagatcaaccggcgcaccctggaggccctgatc
cgcgctggcgccctggattccatcggccccaatcgggccacgctgatgcacacactgccc
caggcgctgtcccgcgccgagcaatacctgcgggatcagagcatggggcaggaggacctg
ttcggggatctggtcgccccgacaccggaggtgacggcgaccgagcaatggccggaatgg
gacgaagagagtcgcctgctggcggaaaaggaaaccctgggcctgtacctcacggggcat
cccatcatccgctatgaggccgaactggcgcagatcaccggcaagcgcatcgccgatctg
ctcagcgacctggccgacagcgcccctggcaatggtggcggcaatgggggtggcaacggc
gagggcggtggttatggccggggtcggcagcgggagcagaccgtgatcgttgccggtctg
gtggtggccatccgcacccgcaacggcaactccggacgcatggccttcctcaccctggat
gaccgcagcggccgggtggaggtgggtctgttcggcgacgactacaaacgctatcagagt
ctgctggtcaaggaccgactgctggtggtggagggcagtgccggcatcgacgagttcagt
ggcaatgtgcggatgcgctgccgtcagatcatggacctggaccaggcccgcgaacagttt
gccaaacgtgtggagttgtccgtgaacggcaaggccagtccgggccttctcgaggggctg
cacgcgcatctggagccgttcagcgagggaccatgccccatctacctgagttactgcaac
gaccaggccagtgcgcgctttcggctgggggcccgctggcaggtgcgccccagtgaggaa
ctgattcatcgcctgcgagagctgctgggggaggagtcagtgcggattgtctaccggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system