KEGG   Halobacillus halophilus: HBHAL_3768
Entry
HBHAL_3768        CDS       T02031                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
hhd  Halobacillus halophilus
Pathway
hhd03030  DNA replication
hhd03430  Mismatch repair
hhd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hhd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HBHAL_3768 (dnaE)
   03430 Mismatch repair
    HBHAL_3768 (dnaE)
   03440 Homologous recombination
    HBHAL_3768 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hhd03032]
    HBHAL_3768 (dnaE)
   03400 DNA repair and recombination proteins [BR:hhd03400]
    HBHAL_3768 (dnaE)
Enzymes [BR:hhd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HBHAL_3768 (dnaE)
DNA replication proteins [BR:hhd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HBHAL_3768 (dnaE)
DNA repair and recombination proteins [BR:hhd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HBHAL_3768 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon tRNA_anti_2 Peptidase_S41 SAS4
Other DBs
NCBI-ProteinID: CCG46113
UniProt: I0JPP3
Position
complement(2729284..2732634)
AA seq 1116 aa
MAFTHLNVQSGYSLMKSTVKIDSLAERASELGFQALALTDEEVMSGSVAFYQACQKRGIK
PLIGMKTSLYSDGGDFPVLFLAKNYKGYQNLMRLSSYIQTQKESLPLSYMNSYKDGLLAI
IMTSSSPWAEPLSRREFSELERGLEYWKSIFSSNDLYLSIKDRDLHSERQIHQPLKEWTS
DKRLSVVAVGEVKYLKQEDASAYQALQAIEEGKRLASDAEERVQHEYLKSSDEMENLFKD
WWPEVIEQSAKITEKCDLQMSLDQQLIPSYPVPEDKSADDYLMELCYEALDEKYQQRRVV
AQERLEHELNVITSMDFSDYFLIVWDFIAYARRQGIHAGPGRGSAAGSIVAYLLNITQID
PLEYNLLFERFLNPERVNMPDIDIDFPDHRRDEVIEYVSRKYGEKHVAQICTFGTFAARS
VLRELFKVMAVDESDSAYILKHIPKGTSDGLVQIVQRSEPLKEYIRSSLPLKKLFHIAAK
LEGLPRHVSTHAAGVVISQKPLVNYTALMNGQSEVYLTQMAMGDLEKIGLLKIDFLGLRN
LTFLEKMESKIRKYENHDFSLSHIPLTDEPTFNLLKEGRTNGVFQLESQGMKSVLRRLKP
SHFEDVVAVNALYRPGPMDYIPVYINRKHEKEEIQYPHPDLKPILASTFGVLVYQEQIMQ
VAQKVAGYSLGQADLLRRAVSKKQSQVLQQQRNEFIAGALKNGYDETVAYELFDWIVKFS
NYGFNRSHAVAYSFISYHLAYLKAHYPSYFMAELINANSGDREKLAAYIREARELKVSVK
APSINRSYMSTQSEGSGIRIGLTAIKGVGYQAAQAILEERRNGAYKHLNDFCLRVISSSV
SRAVIESLIIAGAFDELNTNRASLLASIDQALEQGELFKEFQDQPGMFSEDIDMKEPVSV
DPFPILKKLAMEKELLGTYLSEHPLEYHRKSLRKKGVLSLQQSLLTSRSRKITTAAVVEA
IKEIRTKRGDPMAFMTISDETAEMETVLFPEVYRGAKTWLSEQMLIIVSGKVEERNEREQ
LLISEISKFEIESLPSETKDRLFIKLDKPKEYQALEHLTEAAKYFPGNTPVLLFRTEDRK
TYQLDENYSLNPSRECLQMLEQYFGPSSVALRRNKI
NT seq 3351 nt   +upstreamnt  +downstreamnt
gtggcttttactcacttaaatgttcaaagcggatatagtttaatgaagagtactgtgaaa
attgactcattggcagagagggcaagtgagctgggatttcaagcattggctttgacagat
gaagaagtgatgagtggaagtgtggcattttatcaagcctgtcaaaagcgagggattaag
ccgcttattggtatgaagaccagcttgtactcggacggaggagattttcctgtacttttt
ctggctaaaaactataagggttatcagaatttaatgagattaagttcttacatacaaaca
caaaaagagtctctgcctttatcctatatgaattcatataaagatgggctgctcgcaata
attatgacctcttcctctccctgggctgaaccactatccaggcgtgagttcagtgaactg
gaacgtgggctggagtattggaaatccattttttcatcaaatgacctctatctaagtata
aaagaccgtgatcttcattcagaaaggcagattcaccagccattaaaagagtggacttct
gataaacggctctcagtggttgctgtaggagaagttaaatatctaaaacaagaggatgca
tcagcttatcaagcgcttcaggctatagaagaagggaaaaggctggcatcagatgcagaa
gaaagagttcagcatgaatatttaaaatcaagtgatgaaatggaaaatttatttaaggac
tggtggcctgaagtcattgagcagtctgctaagattactgaaaaatgtgatcttcaaatg
tcactggatcagcagttaattccttcctatccagttcctgaagataagagcgcggacgac
tatttaatggaattgtgttatgaggcgttagatgaaaagtaccaacaaagaagagtagta
gcccaggaacgattggaacatgaattaaatgttatcacctcgatggatttcagtgattat
tttctaattgtctgggactttatagcttatgcacggcggcagggaattcatgccggacca
ggcagagggtcggcggcaggttctatcgtcgcttatcttttaaacattactcaaattgac
cctctagagtataacctattatttgagaggtttttaaaccctgaaagggtgaatatgccg
gacatagatattgactttcctgatcatagaagagatgaagtgatcgagtatgttagccgt
aaatatggagaaaaacatgtagctcaaatctgcacgtttggtacattcgctgcaaggagt
gttttaagagagttgtttaaagtgatggcagtagatgaaagcgactcggcttatatattg
aagcatattccaaaaggcacgagtgacggactcgttcagattgtgcaaaggtcggaacct
ttaaaagaatatataagaagttctcttccattaaaaaaattattccatatagccgccaaa
cttgaaggacttcctcgtcatgtttccacacatgcagcaggagttgtcattagtcaaaaa
cctttagtgaattacacagcccttatgaatggacagagtgaggtctatcttacacaaatg
gccatgggggatttagaaaaaataggcttattaaaaattgattttcttgggctgagaaat
cttacttttttagaaaaaatggaaagtaaaataagaaaatatgaaaatcatgacttttct
ctttcccatattccattaacagatgaacctacttttaacttattaaaagaaggaagaacg
aatggcgtttttcaacttgaatcacagggcatgaaaagtgttttaagaaggctaaagcct
tcccactttgaagatgttgtggctgttaatgctctttatcgaccaggtcctatggattat
atacctgtttatattaatcgaaagcatgaaaaagaagaaatacaataccctcatccggat
ttaaaaccgattttagcctctacttttggggtattggtttatcaagagcagattatgcaa
gtagcgcaaaaagttgctggctatagtctgggccaggcggatttattaagaagggcagta
agtaagaagcagtctcaggtgctgcagcagcaaagaaatgaatttatagccggggcttta
aagaatggatatgacgagacagtggcttacgaactttttgattggatcgtaaagttttct
aattatgggtttaatcgaagtcatgctgtggcgtacagctttatctcttaccatctggct
taccttaaagcccattacccctcttacttcatggcagaattaattaatgcaaatagcggt
gatcgagagaagctggctgcttatattcgtgaagctcgcgagcttaaggtttccgtgaag
gctccttccattaatagaagctacatgtccacccagagtgaaggcagtgggataaggatt
ggtttgacggccataaaaggggtgggatatcaggctgctcaggctattcttgaggaaaga
agaaatggtgcgtataaacacttgaatgatttttgtttaagagttatttccagttcagtc
agccgtgctgttattgaatcactcattatagcgggagcatttgatgaactcaatacgaac
cgggcaagtctgcttgcaagtattgaccaagcccttgagcaaggggagctttttaaagaa
tttcaggatcagccaggtatgttcagtgaagatatagatatgaaggaaccggtaagcgta
gacccgtttccaattttaaaaaaattagccatggaaaaagagttgcttggaacgtatcta
tccgagcacccgctggaataccatcgcaaatctcttcgtaaaaaaggggttctatcctta
cagcaatcattattgacgagcagatcccggaaaatcacaacggccgccgtagtagaagct
ataaaagaaattagaacaaaacggggagatcctatggcatttatgacgattagtgatgaa
acagcggaaatggaaactgtgctctttccagaagtctacagaggtgcaaaaacttggttg
tctgaacaaatgctgatcatcgtctcagggaaagtagaagaaagaaatgaacgtgagcag
ctgctcatttctgaaatttccaagtttgagatcgaaagtttgccctcggaaacaaaggat
cgtttgtttattaagttggataaacccaaggaataccaggcattggagcacttaacagag
gctgcaaagtatttcccgggtaatacccctgtattgttattcaggacagaagatagaaaa
acctatcagctggatgaaaattattccttgaatccatccagagaatgtcttcaaatgctg
gagcaatattttggaccttcctcagtggctctgcgtcgcaacaagatatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (50)   

Download RDF
DBGET integrated database retrieval system