KEGG   Helicobacter hepaticus: HH_0242
Entry
HH_0242           CDS       T00133                                 
Name
(GenBank) hypothetical protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
hhe  Helicobacter hepaticus
Pathway
hhe03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hhe00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HH_0242
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hhe02044]
    HH_0242
Secretion system [BR:hhe02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HH_0242
SSDB
Motif
Pfam: Phage_GPD Phage_base_V DUF3540 DUF2345 Prok-TraM Cbl_N2 DUF6484
Other DBs
NCBI-ProteinID: AAP76839
UniProt: Q7VJK1
Position
complement(231618..234416)
AA seq 932 aa
MSAFLSLDINSITFTITKAHIRESLQSPFHITCNGFIESFYADIFSATFASLGKTNSPSH
TIQSHTQDTDFASSAPPYSFALDQPFNLQLLQDNFALLYISNPYGNTNYHSALSISLGNT
STPIKSYKGIITHIEYLGSKSNVSLDTNNTINTITDITNTSQQKTLSSLDIPTPKSINHR
HFFTFTLTSPLIRLSLNKANRIYTDKTPLDILKDILTAYTPQLCKQIDFSSLSQIDNPLE
IITQYEESDLDFITRLAHNNGIYFYEDNDTLYVCHHTPYTPIPLTKVPFNPNVKTHNNLN
EPCIFALTHSHHIHTKQFNFFSNDANNPQINTYMYSKYIDKQSPDIATHSTSNDTSLAQE
DMNNPYNYTASMQSVFIPNVSFTYQANIKSLCSNQAQHTANTQALMNAQSNIYTLCLAQR
LYIESKNKSLLGNNIQDNKTQEFINEYTIIALEQTLINESILADTLPSHQQANDSNISRF
KDTYSNLITLLPSNLSYMPTPKPKPNPPSLMQGIVVGEEYIKAKNIKEANASIIKQSNTL
YTDNFGRVKVRLHAFMAQALLTDNDIHTTPNTNNTKHSNNTHLEDDLYTLNTHTAFLRVA
SPIASASSGFYHTPRVGDEVLISYLNNDIDMPIIIGSLYNPSNPALPPLPLNAHQTSLSA
RTLNNSSALQAENTNSHHNLIESGFNEITLSNLKEQEHIYLQAQRDYEELIKHNFLQTIH
NNKESQVEGTYNERIKKIHTQTIDLAKIVSIGGEYNTNVALSKDTIVGLSHTLNVGVDNK
VRIAKKSSEYVGEDKEVEIGGNLNTSIKQDESRNVGGNKREVVEGDSDISIEKKFNIQTQ
GEIAIHSNENIHLSSPQSLSLESDRAAVMVADNITMIADSNYLLNANNEATIQVSDTSIV
AKSDSIVIKAGGVEVVIDSKGLVVKGGEVKAE
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgagtgcttttctttctttggatattaactctatcacctttaccatcaccaaagcccat
attagagaaagtttgcagtctccttttcatattacttgtaatggttttatagaatccttt
tatgcagatatattttctgctacttttgcttctttgggtaaaacaaactctccctcacac
acaatccaatctcatacccaagataccgattttgcatcatctgctcccccttattctttt
gcattagaccaacctttcaatctccagctattgcaagataattttgctctattatatatt
tctaatccctatggcaacacaaactatcatagtgctctttctatctctttaggtaatact
tctacccctattaaatcatataagggtatcattacacatatagagtatttaggttctaaa
tctaatgtttccttagatacaaataacacaatcaacactattactgacataaccaatact
tctcaacaaaagacactctcttccttagatatacctacacctaaatctataaaccataga
catttctttacctttacactcacttctcctctcataagactttcactcaataaagcaaat
agaatctatacagataaaacacctttagacatactcaaagatatactcactgcttatact
ccacaattatgcaaacaaatagatttttcttctcttagccaaattgataatcctttagag
attatcacccaatatgaagaatctgatttagatttcatcacacgattagctcataataat
ggtatatacttttatgaagacaatgataccttatatgtatgtcatcacacaccctatact
cctattcctctcactaaagtcccttttaatcctaatgtaaaaacacataataatcttaat
gaaccctgtatttttgctctcacacattctcatcatatacacacaaaacaatttaacttc
ttcagcaatgatgcaaacaatcctcaaatcaatacttatatgtattcaaaatatattgac
aaacaatccccagatattgccactcattctacatcaaatgatacttctctagcacaagaa
gatatgaataatccttataactatactgcctctatgcaaagtgtatttatacccaatgtg
agttttacctatcaagcgaatataaagtctctttgctctaatcaagcccaacatactgcc
aatactcaagctcttatgaacgctcaaagcaatatctatacactctgtttagctcaaaga
ttatatatagaatctaaaaataaatctcttttaggaaataatattcaagataataaaacg
caagagtttataaatgaatatactatcatagcattagagcaaacccttataaacgaatct
attcttgcagatactttaccctctcatcaacaagccaatgatagcaacatctctcggttc
aaagatacttatagtaatcttattactctcttgccttcaaacctatcttatatgcctaca
cccaagcccaaaccaaaccctccatctcttatgcaaggtatagttgtaggagaagagtat
ataaaagccaagaatattaaagaggctaatgcaagtatcatcaaacagagcaacacgctt
tatacagataactttggcagggtaaaagtaaggctgcatgcctttatggcacaagcttta
ctcacggataatgatatacacacaacacccaatacaaacaataccaaacattcaaacaat
actcatttagaagatgatttatatactcttaatacacacacagcttttcttagagtagcc
tctcctattgcaagtgcaagttcaggtttttatcatactccaagagtgggagatgaagta
ttaataagttacttaaataatgacatagatatgcccatcattataggcagtctctacaat
ccaagtaatcctgccttacctcccctccctttaaatgctcatcaaacaagtttaagtgca
agaactcttaataatagcagtgcattgcaagcagagaatacaaactctcatcacaatctc
atagaatctggattcaatgaaatcacgctctccaatctcaaagaacaagaacacatctat
cttcaagcacaaagagattatgaagaactcattaagcataactttctccaaaccatacat
aacaataaagaatctcaagtagagggaacttataatgaaaggattaaaaagattcatact
caaaccatagatttagcaaagattgtaagtattggaggagaatataataccaatgtagct
ttatctaaagataccattgtaggattaagtcatactttaaatgtaggagtagataacaaa
gtaaggattgcaaagaagagtagtgaatatgtaggagaggataaggaggtggagataggg
gggaatctcaatacaagtatcaaacaagatgagagtaggaatgtaggggggaataagaga
gaggtggtggagggggacagcgatataagcattgagaaaaagtttaatattcaaacacaa
ggtgaaattgctattcattctaatgagaatattcatttgtcatctcctcaatctttgagt
ttagaatctgatagagctgctgtaatggttgcagacaatataacaatgattgcagattct
aattatctccttaatgctaataatgaagcaacaattcaagtgagcgatacttctattgta
gccaaaagtgattctatcgttattaaagctggtggagtagaagtagtcatagattctaaa
ggattagtcgttaaaggtggggaggtaaaggcagagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (38)   

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