KEGG   Halomonas hydrothermalis: CLM76_01535
Entry
CLM76_01535       CDS       T05117                                 
Name
(GenBank) RNA polymerase sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
hhh  Halomonas hydrothermalis
Brite
KEGG Orthology (KO) [BR:hhh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hhh03021]
    CLM76_01535
Transcription machinery [BR:hhh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CLM76_01535
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r4_2
Other DBs
NCBI-ProteinID: ATH79431
Position
complement(342860..343834)
AA seq 324 aa
MSMLEKDLQEIDLDEVEEALDEADDDATAEEEEFEKALGRDDRQSTQSLDATQIYLNEIG
FSPLLTPEEEVYYGRLARKGDALGRSRMIESNLRLVVKIARRYLNRGLTLLDLIEEGNLG
LIRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYLRAARELT
QKLDHEATAEEIAEHLDKPVETVKKMLGLNERVSSVDYPMGGESDKPLIDTLTDDDVLGP
EACLVDGDVREHVDHWLDELSEKQREVVVRRFGLRGHEAATLEEVGAEIGLTRERVRQIQ
VEALKKLRRSLEKQGLSLDSIFEA
NT seq 975 nt   +upstreamnt  +downstreamnt
atgagtatgctggagaaggacctacaggagatcgacctcgacgaggttgaggaggcgctg
gacgaggctgatgacgatgccacggctgaggaggaagagttcgagaaagcgcttggtcga
gacgatcgccaatccactcagagtctggatgctacccagatctatctcaatgaaatcggc
ttttcgccgctattgacgccggaagaagaggtctattacggacgtctggcgcgcaagggt
gatgccttggggcgctcgcggatgatcgagtccaacctgcggttggtggtcaagattgcc
cgacgctatttgaatcgaggtttgacgctgctggatttgatcgaagagggcaacctcggg
ctgatccgcgcggtggaaaagttcgaccccgagcggggttttcgcttctccacttatgcc
acctggtggattcggcaaaccatcgaacgcgctttgatgaaccagacgcgcaccattcgt
ctgccgattcatgtggtcaaggagctgaacatctatctgcgtgccgcccgtgagttgacc
cagaagctcgaccacgaagccaccgcagaagagattgccgagcatctcgacaagccggtc
gagaccgtcaagaagatgctggggctcaacgaacgtgtttcctcggtggactacccaatg
ggcggcgagagcgacaagccactcatcgataccctcaccgacgatgatgtgctgggtccg
gaagcatgcctggtggatggagacgtgcgcgagcatgtcgaccactggctggacgagctc
agcgagaaacagcgcgaggtggtggtgcgtcgctttggcctgcgtgggcatgaagccgcc
acgctggaggaagtgggtgccgaaatcggtctgacccgcgagcgtgttcgtcagatccag
gtagaagcgttaaagaagttgcgacgctcgctggaaaaacaggggctttctctggattcg
attttcgaggcgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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