KEGG   Halobacteroides halobius: Halha_1588
Entry
Halha_1588        CDS       T02401                                 
Name
(GenBank) bacterial nucleoid DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
hhl  Halobacteroides halobius
Brite
KEGG Orthology (KO) [BR:hhl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hhl03032]
    Halha_1588
   03036 Chromosome and associated proteins [BR:hhl03036]
    Halha_1588
   03400 DNA repair and recombination proteins [BR:hhl03400]
    Halha_1588
DNA replication proteins [BR:hhl03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Halha_1588
Chromosome and associated proteins [BR:hhl03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    Halha_1588
DNA repair and recombination proteins [BR:hhl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      Halha_1588
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF4836 DUF937 HU-CCDC81_euk_2 OTU1_UBXL HU-DNA_bdg DUF3562 VP7
Other DBs
NCBI-ProteinID: AGB41526
UniProt: L0K931
Position
complement(1603095..1603409)
AA seq 104 aa
MAKNITKNDLVDQIAEKTGITKKDTKETVNTMLEVVTENLRNEAKKDAEERSKIQFIGFG
SFEVRDRSARTGRNPQTGEEMEIPARTVPAFKAGKSLKETVNVK
NT seq 315 nt   +upstreamnt  +downstreamnt
atggcaaaaaatatcacaaaaaatgatttagtagatcagattgcagaaaaaacaggaatt
actaaaaaggatactaaagaaacagttaacacaatgttagaagtagttactgaaaatcta
agaaacgaagctaagaaagatgctgaggaaagatctaaaattcaatttattggatttggt
agctttgaagtacgggatcgtagtgctagaacaggtcgtaatcctcaaacaggtgaggaa
atggagattccagctcgaacagtacctgcttttaaagctggtaaatcattaaaagagact
gttaatgtaaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

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