KEGG   Halobacteroides halobius: Halha_2296
Entry
Halha_2296        CDS       T02401                                 
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
hhl  Halobacteroides halobius
Brite
KEGG Orthology (KO) [BR:hhl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hhl03009]
    Halha_2296
Enzymes [BR:hhl01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Halha_2296
Ribosome biogenesis [BR:hhl03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Halha_2296
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 TRAM Methyltransf_25 Methyltransf_15 MTS Cons_hypoth95 Met_10 PrmA Methyltransf_11 TehB Methyltransf_32 PCMT Methyltransf_12 TPMT RrnaAD TRM N6_N4_Mtase UPF0020 Flot NodS RE_EcoO109I Methyltransf_23 ZZ
Other DBs
NCBI-ProteinID: AGB42170
UniProt: L0KC91
Position
complement(2293327..2294688)
AA seq 453 aa
MVKPVKVGDMTTIKLENIAYGGDVVGRKDDFAIFVTGGVPGEVVKIKVTEVKRNYGRGKV
VDVVAPVEERIDSECPKYDLCGGCQMQHIDYTAQLNYKQQMVEDAIERIAKLDDIKINQV
KGMENPYLYRNKAQFPLGVEDEEVITGFYAAGSHKLIKVKDCQIQHPVINRIVDRAVKLI
EDYNLSIYNEEIHQGLLRHLVVRVGVCTNQAMLVLVTKDEKFVKGQEIAHKLLEEVPELI
SVYQNVNPEQTNVVLGDKTALLAGQEYILDYIGPIKYQISPLSFFQVNSLQTKVLYDQVL
EYAKLTGEEKVLDAYCGLGSISLYLANQAQEVYGIEVVPEAIEQAKENAKLNDINNCQFA
VGKVKDVLPQLKNQFSPEVIVVDPPRKGCHEEVLEAFAKIKPQRIVYVSCKPTSLARDLK
RLKDLGYYTEEIQPVDMFPQTYHIENVALIKKK
NT seq 1362 nt   +upstreamnt  +downstreamnt
atggtcaaaccagttaaagtaggagatatgacaactattaaattagagaatatagcttat
ggtggagatgtagtaggtagaaaagatgatttcgctatttttgttactggtggagtgcca
ggagaagtagtaaagataaaggttacagaagtaaaaagaaattatggtcgggggaaggta
gtagatgtagttgcaccagtagaggaaagaattgattcggagtgtcccaagtatgattta
tgtggtggatgtcagatgcaacatattgattatacggcgcaacttaattataaacaacag
atggttgaagatgctatagagcggattgccaagctagatgatattaagattaatcaagtt
aagggtatggaaaatccttatctatatcgtaataaagctcagtttcctttaggggttgaa
gatgaagaagtaattacgggtttttatgcagctggaagtcataagttaattaaagttaag
gattgtcaaatccaacatccagttattaatcgaattgttgatagagcagtaaaattaata
gaggattataatttatctatttacaatgaagaaattcatcaagggctattgcgccattta
gtagtcagggtgggagtgtgtactaatcaagcaatgttagtcttagttactaaagatgag
aaatttgttaagggccaagaaatcgcccataaattactagaagaagtaccagagttaatt
agtgtttatcaaaatgtaaatccagagcaaactaatgtagtactaggagataagactgca
ttattagctggtcaagagtatatacttgattatattggcccaattaagtatcaaatctcc
cctttgtcattctttcaggttaattcgttacagactaaggtgctttatgatcaggtgtta
gagtatgctaagttgacaggtgaggagaaggtactggatgcttattgtggtttgggatct
atctctctctatttagccaatcaggcccaggaggtttatggtattgaggttgttccagaa
gcaattgaacaagctaaagaaaatgctaaattaaatgatattaataactgtcaatttgct
gtaggaaaggttaaggatgtgctacctcaacttaagaatcagttttcaccagaggtaatt
gttgttgatcctcctcgtaagggctgtcatgaagaagttttagaggcctttgcaaaaatt
aaacctcaacgaattgtgtatgtatcatgtaaaccaactagtttggcgagggatttaaag
aggctaaaagatttaggatattatacagaagagattcagccagttgatatgtttcctcag
acttatcatattgaaaatgtagcattgattaagaaaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (41)   

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