KEGG   Hydrogenobaculum sp. HO: HydHO_0021
Entry
HydHO_0021        CDS       T02482                                 
Name
(GenBank) pseudouridine synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
hho  Hydrogenobaculum sp. HO
Brite
KEGG Orthology (KO) [BR:hho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hho03009]
    HydHO_0021
Enzymes [BR:hho01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     HydHO_0021
Ribosome biogenesis [BR:hho03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HydHO_0021
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2
Other DBs
NCBI-ProteinID: AGG14362
UniProt: M1R5F2
Position
complement(21193..21912)
AA seq 239 aa
MRLNRFLSLAGVCSRRKADEYIEKGYVKVNNKIVKELGVTINPDEDIVEFRGRIVKAQKP
VYIMLNKPCCYLTSLGEKEEKPTIRELIKDVGVRVYPAGRLDYNVEGLLILTNDGELANR
IIHPRYKLPKVYIATVKGEIDDETLEKMKRGVKLEDGFVKPDSLKLLKRFKNGANIEITF
HEGKNHLVKRFFLAFKKPVKHLIRTAIGPISLGNLPKGKWRHLKPNEVKLLFEALHYKA
NT seq 720 nt   +upstreamnt  +downstreamnt
atgaggttaaatagatttttatctttggctggagtatgctctagaagaaaagcagatgag
tatatagaaaaaggctacgttaaggtaaacaacaagatagtaaaagaacttggtgtcact
ataaatccagatgaagatatagtagagtttagaggtcgcatagtaaaagctcaaaaacca
gtatatataatgttaaacaaaccatgttgctaccttacatctttgggagaaaaagaagaa
aagcccaccataagagaactaataaaagatgtgggtgttagggtatatccagctggaaga
ttagattacaacgtagaagggcttttgatactcaccaacgacggagagttggcaaacaga
ataatacatccaagatacaagctaccaaaagtatatatagccacagtaaaaggtgagata
gatgatgaaacattggaaaagatgaaaaggggtgtaaaactagaggatgggtttgtaaaa
ccagatagtttgaagcttttaaaaaggtttaaaaatggtgcaaacatagagataactttc
cacgaaggtaaaaatcatcttgtaaaaaggtttttcttagcttttaaaaaaccagtaaaa
catcttataagaacagcgataggtcctatttctcttggtaatctgccaaaaggtaaatgg
agacatttaaaaccaaatgaagtaaaacttctatttgaagccctacattataaagcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system