KEGG   Hydrogenobaculum sp. HO: HydHO_0769
Entry
HydHO_0769        CDS       T02482                                 
Name
(GenBank) SMC domain protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
hho  Hydrogenobaculum sp. HO
Brite
KEGG Orthology (KO) [BR:hho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hho03400]
    HydHO_0769
DNA repair and recombination proteins [BR:hho03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HydHO_0769
    Archaeal homologous recombinant proteins
     HydHO_0769
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 GAD MAAL_N ABC_tran
Other DBs
NCBI-ProteinID: AGG15090
UniProt: M1RSQ4
Position
complement(692582..695467)
AA seq 961 aa
MRPLVLELEGFLSYKEKTVIDFSDLSLFAITGMTGAGKTTIIDAITFALYGKCPRFEKGA
SKEDYISKGKDFFRVSLTFSLNDKTYTVGRYLKSGKNIVVSLKENGKEIITEEKNKLREE
RIKEILNMDYDTFTKVIVLPQGEFAKFIKPESPQERREIIMRLSNLDKIDKMRELAASQK
KDLKNEIDSILLMIDNLKSTQENVEELQKKLDSLEQELSVKTSEKKVLLEKLSKAKKKQE
LKTELNKLTAEYENLENQKEKMELIKKRIEFLKPKLSLKSDIERYIKLKNELEKTALEFD
KKNKEYFLKEQEYNKLLMNFETIKADYEQTKYQEERVERGYKIISILENALSIESYITND
ETRIRDLEQQLKIKKGERSTLLAEIEHYENLSKEVDKEAIEKDIENITMMMSQLELKEKE
KNKKLLEQKKLMEEVDDINKEILKYKEEQKELDQELNANKNNIVLYYSNMLKTLLKENDT
CPVCGGVYHEKEHTTMLDIEIEEDIIKNIEDIKRKIALLEDRLKSKKEALEKLSEEIESL
EKELLEKEILQSRLKELKQRREFQDNIQKNLEKLTSKKDKLENEILLLNKQKEALEKDLY
SKKESLKTLEKELLSYGVKEGHLQNKKNAIDQYKNKLDEIKKEIQDKRKIYEDTKEMINT
YEKSIMLLKEQVSSLSAKKTTISEELNELETKLSSIEDKEKVLEELNRLENYERTYNEYI
LKLSNLKEQIKLKENEIANITEEAPPQELENMLEVLEEYVKTLNQEIGSISSKINQAKEN
EKQIKELEETIKDLEKKYNIYERLEQDLKSDALQAYISQKIIEELVKYANVYASKMEFLY
SFKVEEKSREKDSIVVEDAFGNTRPIKSLSGGETFITSLCFALALSEAVGSQNLKSLFID
EGFGTLDKETLEKVGNALELLSQNINKMVGIITHVESLAEKFPNRLIVTKTKDGISKIEV
V
NT seq 2886 nt   +upstreamnt  +downstreamnt
atgagacctttggtattggagttagagggttttttgtcttacaaggaaaaaactgttata
gatttttctgatctttctttgtttgccatcactggaatgaccggagctggcaagaccacc
ataatagatgctatcacatttgccctttacggtaaatgcccaagatttgaaaaaggagct
tctaaagaagactacatatcaaaagggaaagatttttttagagtatccttaacattttct
ttgaacgataaaacatacaccgtgggaagatatttaaagagcggtaaaaatatcgtagtt
tctttaaaagaaaatggaaaagaaataattacagaagaaaaaaataagctaagggaagaa
cgaataaaagaaatattgaacatggattacgatacttttacaaaagtgatagttttgccc
caaggagaatttgcaaagtttattaaaccagaaagcccacaagaaagaagagaaataata
atgagattaagcaatttagataaaatagataaaatgagagagcttgcagcttctcaaaaa
aaagatttaaaaaatgaaatagattcgatattgctaatgatagataacttaaaatctact
caagaaaatgtagaagagcttcaaaagaaactagattctttggagcaagagcttagtgtt
aaaacttcagaaaaaaaagttttattagaaaagcttagtaaagccaaaaaaaagcaagaa
ttaaaaaccgaactaaacaaactaacagccgaatatgaaaatctagaaaaccaaaaagag
aaaatggagcttatcaaaaaacgtattgagtttttaaaaccaaaacttagcctaaaatca
gatatagaaaggtatataaagttaaaaaacgaattagagaaaacagcgcttgagtttgat
aaaaaaaataaagagtattttttgaaagaacaagaatacaacaaacttttgatgaatttt
gaaacaataaaagccgattacgaacagacaaaatatcaagaggagcgcgtagaaagaggc
tataaaataatatcgatattagagaatgcattatcgatagaatcttatataacaaacgat
gaaactagaataagggatcttgaacagcagttgaaaattaaaaaaggagaaagatcaaca
ttattagctgagatagaacactatgaaaatctctcaaaagaagtagataaagaagctatt
gaaaaagatattgaaaatattacaatgatgatgagtcaattggagttaaaggaaaaagaa
aagaataaaaaactattagaacaaaaaaagctaatggaagaagtagatgatataaacaaa
gagattttaaaatacaaagaagaacaaaaagaattagatcaagagttaaacgccaacaag
aataatattgtcttatattatagcaacatgttaaaaacccttttaaaagaaaacgatact
tgtcctgtttgtggtggtgtttatcacgaaaaagaacatactacaatgctagatatagaa
atagaagaagatatcataaaaaatatagaagatattaaaagaaaaattgctttgttagag
gatagactaaaatcaaaaaaagaagcgttggaaaaactttcagaagaaatagaaagcctt
gaaaaggaattgttggaaaaagagattttacaatcaagattaaaagaattaaagcaaaga
agagaatttcaggataatatacaaaaaaatctagagaaattaacaagcaaaaaggataag
ttggaaaatgagattttgcttttaaacaaacaaaaagaagctttagaaaaagatttatac
agcaaaaaagaatctttgaaaactttagaaaaagagcttttatcttacggtgttaaagaa
gggcatttgcaaaataaaaaaaatgctatagatcaatataagaataagttagatgagata
aaaaaagaaatacaagacaaaagaaagatatacgaagataccaaagaaatgataaatact
tatgaaaaaagtatcatgcttttaaaagaacaagtatcttctttgagcgccaaaaaaact
acaataagcgaagaactaaatgaacttgagacaaaattgtcttctatagaagataaagaa
aaagtattagaagagttaaatcgtttagaaaattatgaaagaacatacaatgaatatata
ttaaaattgtccaatttaaaagaacagataaaattaaaagaaaatgaaatagcaaacata
acggaagaagcaccaccccaagagttggaaaacatgttggaagtcttagaagaatatgtg
aaaacgctaaatcaagaaataggttctataagctctaaaataaatcaggcaaaagaaaac
gaaaaacagataaaagagcttgaagaaactataaaagaccttgaaaagaaatacaatata
tatgaaagactggaacaagatttgaaaagcgatgcactgcaagcctatatatctcagaaa
ataatagaagaactggtaaaatacgctaacgtatacgcttcaaaaatggagtttctatat
tcttttaaagttgaagaaaagtctcgtgaaaaagatagcatagtagtagaggacgctttt
ggaaatacaaggcctataaaatctttgagcggtggcgagacttttataacgtctttgtgc
tttgctttagcactcagcgaagctgtgggttctcaaaatcttaaatcacttttcatagat
gaggggtttggtacacttgataaagaaaccctagaaaaagtaggtaatgctttggagctt
ttgagtcaaaatataaataaaatggtaggtattattacacacgttgaaagtttggctgaa
aaatttccaaataggttgatagtaacaaaaacaaaggatggtatctcaaaaatagaggtt
gtatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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