KEGG   Hydrogenobaculum sp. HO: HydHO_0848
Entry
HydHO_0848        CDS       T02482                                 
Name
(GenBank) RNA modification enzyme, MiaB family
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
hho  Hydrogenobaculum sp. HO
Brite
KEGG Orthology (KO) [BR:hho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hho03016]
    HydHO_0848
Enzymes [BR:hho01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     HydHO_0848
Transfer RNA biogenesis [BR:hho03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    HydHO_0848
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM NusG_add Fib-H_N
Other DBs
NCBI-ProteinID: AGG15167
UniProt: M1R7C4
Position
788227..789534
AA seq 435 aa
MKYFIKTYGCQMNINDSEKIKGILQTQGYEPATKEEDADLVILNTCTIREKPDQKVWSHL
GEIKKLKSKNPNVKIGVCGCMAQRAGYEIASKMPFIDLVFGTKNIHHIPKLLEDVKLGNR
AIEILEEEDPLENILDSYPTVRDNSYCAYVTIMRGCDKECTYCVVPFTRGKERSRNPQSI
LDEVKSLVDSGVMEIHLIGQNVTAYGKDIGYPFYKLLENISKIEGVKRIRFTTGHPIDMT
DDIIETMASLPNMVNHLHLPFQAGSDRILELMKRNYTKAYYLNRIEKLKAKIKDITFSTD
VIIGFPTETEEDFQHTLDVVQTVEFEQVFSFKYSKRPNTPAYYMEDDLTDEIKTDRMKRL
LEIQKAITSKLMRRYENTIQKVLVEDKKENTYIGRTTTNVWCNITSSQDLLGKEVEVLIT
KAGFQSLDGVVQNIL
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgaaatactttataaaaacttacggctgtcagatgaatataaacgattctgagaaaata
aaaggtattttacaaacacaagggtatgaacctgctacaaaagaagaagatgccgatttg
gttatattaaacacatgcaccataagggaaaaaccagatcaaaaagtttggtctcatctt
ggagagattaaaaagttaaaatctaaaaatccaaatgtaaaaataggtgtctgtggatgt
atggcccaaagagcaggatatgaaatagcttcaaaaatgccttttatagatttggtattt
ggcactaaaaacatacaccatatacccaaacttttggaagatgtgaagcttggcaacaga
gcaatagaaatattggaagaagaagaccctttagaaaacatactagattcttatcctacc
gtaagagataacagctactgtgcttatgttactataatgagaggctgcgacaaagaatgc
acttactgcgtggtaccttttacaaggggtaaagaaagaagcaggaaccctcaaagtatt
ttagatgaggtaaaatcccttgtagatagcggtgttatggaaatacacctaataggtcaa
aatgttaccgcttacggcaaagatatcggttaccctttttataagcttttagaaaacata
tcaaaaatagaaggcgtaaaaagaataagatttaccacaggtcatcctatagatatgaca
gacgatattatagagacaatggcaagccttccaaatatggtaaaccatttacaccttccg
ttccaagcaggctcagataggatattagagcttatgaaaagaaactatacaaaggcttac
tatctaaataggatagaaaaactaaaagctaaaataaaagatataactttctctacagat
gtcatcataggttttcccacagaaacagaagaggacttccagcatactttagatgtagtg
caaactgtcgagtttgagcaagtgttttcttttaaatattcaaaacgcccaaatacacct
gcatactatatggaagatgatctaacagatgaaataaaaacagacaggatgaaaagactc
ttagaaattcaaaaagcaataacctcaaagcttatgagaagatatgaaaatactattcaa
aaagtgcttgtagaggacaaaaaagaaaacacatacataggaaggactaccacaaacgta
tggtgcaacatcacatcttcacaagatctattaggaaaagaggttgaagtgcttatcaca
aaggctggcttccaaagtttagacggtgtagttcaaaacatcctttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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