KEGG   Helicobacter pylori Shi112: HPSH112_03910
Entry
HPSH112_03910     CDS       T02037                                 
Name
(GenBank) recombination and DNA strand exchange inhibitor protein
  KO
K07456  DNA mismatch repair protein MutS2
Organism
hhp  Helicobacter pylori Shi112
Pathway
hhp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hhp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HPSH112_03910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhp03400]
    HPSH112_03910
DNA repair and recombination proteins [BR:hhp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     HPSH112_03910
SSDB
Motif
Pfam: Smr MutS_V AAA_22 AAA_15 AAA_21
Other DBs
NCBI-ProteinID: AFI00983
Position
781141..783390
AA seq 749 aa
MNNNNNTPPKPLEESLDLKEFIALFKTFFAKERDTIALENDLKQTFTYLNEVDVIGLPTP
KSVKESNLIIIKLTKLGTLHLDEIHEIVKRLRYIVILQNAFKTFTHLKFHERLNAIVLPP
FFNDLIALFDDEGKIKQGANATLDALNESLNRLKKESAKIIHHYAHSKELAPYLVDTQSH
LKHGYECLLLKSGFSSAIKGVVLERSANGYFYLLPESVQKIAQKIAQIDNEIDCCIVEMC
QTLSHSLQKHLLFLKFLFKEFDFLDSLQARLNFAKAYNLEFVMPSFTQKKMILENFSHPI
LKEPKPLNLKFEKSMLAVTGVNAGGKTMLLKSLLSAAFLSKHLIAMKINAHHSIIPYFKE
IHAIINDPQNSANNISTFAGRMKQFSALLSKENMLLGVDEIELGTDADEASSLYKTLLEK
LLKQNNQIIITTHHKRLSVLMAENKEVELLAALYDEEKERPTYTFLKGVIGKSYAFETAL
RYGVPHFLIEKAKAFYGEDKEKLNVLIENSSALERELKQKNELLENALKEQEDLKNAWLL
EMEKQKETFHNKKLELEKSYQQALNILKSEVASKDTSSMHKEIHKASEILNKHKTNQEIP
QIITSFQANEKARYKNESVLIVQILDKGYYWIETELGMRLKAHGSLLKKIQKPPKNKFKP
PKTTIPKPQKASLRLDLRGQRSEEALDSLDAFLNDALLGGFEEVLICHGKGSGILEKFVK
EFLKNHPKVVSFSDAPINLGGSGVKIVKL
NT seq 2250 nt   +upstreamnt  +downstreamnt
atgaataataataataataccccacccaaacccctagaagaaagcctggatttaaaagag
tttatcgctctttttaaaactttttttgcaaaagaaagagatactattgctttagaaaac
gatctcaagcaaactttcacttatttaaacgaagtggatgtgatcggtttgcctacccct
aaaagcgtgaaagaaagcaatctcattatcatcaaactcaccaaattagggacgctccat
ttagatgaaattcatgagattgtcaaacgattgcgctacattgtcattctacaaaacgct
tttaaaactttcacgcatttaaaatttcatgaacgccttaacgctattgtcctgccccct
ttttttaatgatctaatcgctttatttgacgatgagggaaaaatcaaacaaggggctaac
gctaccctagacgctttgaatgaaagtttgaaccgccttaaaaaagagagcgctaaaatc
attcaccattacgcccattctaaagagcttgccccttatttagtggatacgcaaagccac
cttaagcatggttatgaatgccttttattgaaaagcgggttttctagcgcgattaaaggc
gttgtgctagaaaggagcgctaatggctatttctatcttttgcctgaaagcgtgcaaaaa
atcgcgcaaaaaatcgcacaaattgataatgaaatagattgctgtattgttgaaatgtgt
caaactctaagccatagcttgcaaaaacaccttttatttttaaaattcctttttaaagaa
tttgattttttagacagcttgcaagcccggcttaatttcgctaaagcctacaatttagaa
tttgtcatgccaagctttactcaaaaaaaaatgattttagaaaacttttcgcaccccatt
ttaaaagagccaaagcccttaaatttgaagtttgaaaaatccatgctcgctgttaccggc
gtgaatgcgggcgggaaaaccatgctcttaaaatcgcttttaagcgcggcttttttaagc
aagcatctcattgctatgaaaatcaacgcccatcattccattatcccctattttaaagaa
atccacgccattattaatgacccccaaaacagcgcgaacaatatctctacttttgccggc
agaatgaagcaatttagcgctcttttatccaaagaaaacatgcttttaggcgttgatgaa
attgagctggggactgacgctgatgaagcgagcagtttgtataaaaccctgttagaaaaa
ttgcttaaacaaaacaaccaaatcattatcaccacgcaccacaaacgcctgagcgtgtta
atggcagaaaacaaggaagtggaattactagccgctctttatgatgaagaaaaagaacgg
cccacttacacttttttaaaaggggttattggcaaaagctatgcgtttgaaaccgctttg
cgctatggcgtgccgcattttttgattgaaaaagcgaaagctttctatggcgaagataag
gaaaaattgaatgttttgattgaaaattccagcgcattagaaagggaattgaagcaaaaa
aacgaacttttagagaacgctttaaaagagcaagaagatttaaaaaacgcatggctttta
gaaatggaaaaacaaaaagaaacctttcacaataaaaaattggaattggaaaaatcctac
caacaagccctaaatatcttaaaaagcgaagtcgcttcaaaagataccagctccatgcat
aaagaaatccataaagcgagcgaaattttaaacaagcataaaacaaatcaagagatcccg
caaatcataacgagctttcaagccaacgaaaaagcgcgctataaaaatgaaagcgtgctg
attgtgcaaattttagacaagggctattattggatagaaaccgagcttggcatgcgttta
aaagcgcatgggagtttgttgaaaaaaatccaaaaaccccctaaaaacaaattcaaaccc
cctaaaacgaccattcctaaaccccaaaaagcgagcttacgccttgatttaagggggcaa
cgcagcgaagaagccctagattcactagacgcttttttaaacgacgcgcttttagggggc
tttgaagaagtgcttatttgccatggcaaggggagcgggattttagaaaagtttgtgaaa
gaatttttaaaaaaccaccctaaagtggtaagctttagcgacgctcccattaatttaggc
ggtagtggggttaaaatcgttaaattgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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