KEGG   Helicobacter pylori Shi112: HPSH112_04575
Entry
HPSH112_04575     CDS       T02037                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
hhp  Helicobacter pylori Shi112
Pathway
hhp00470  D-Amino acid metabolism
hhp00550  Peptidoglycan biosynthesis
hhp01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hhp00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HPSH112_04575 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    HPSH112_04575 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hhp01011]
    HPSH112_04575 (murD)
Enzymes [BR:hhp01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     HPSH112_04575 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:hhp01011]
 Precursor biosynthesis
  Amino acid ligase
   HPSH112_04575 (murD)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C MurD-like_N DUF3531
Other DBs
NCBI-ProteinID: AFI01114
Position
complement(924672..925940)
AA seq 422 aa
MKISLLGHGKTTLALGRFFRKNHNEVKFFDDQFTSSFKDSEGFVCYPSKDFNPNDSQLEI
VSPGISFTHPLVIKAKHLVSEYDYIDSLFDLVFTPTIISISGTNGKTTTTEMLTMLLEDF
KAVSGGNIGTPLIELFEKQSPLWVLETSSFSLHYTNKAYPLIYLLINVEADHLTWHCNFE
NYLNAKLKVLTLMPKTSLAILPLKFKEHSSVQNSQAQKIFFDKSEEVLERLKIPSNALFF
KGAFLLDAALALLVYEQFLKIKNLKWQDYRENALKKLNAFKVGSHKMEEFRDKQGRLWVD
DSKATNIDATLQALKTFKNQKIHLILGGDIKGVNLTPLFEEFKNYEISLYAIGSSASIIQ
ALALEFNVSCRVCLELEKAVQEIKSVLSQNEIALLSPSAASLDQFSSYKERGEKFKAFVL
KD
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaaaatctctttattggggcatggcaaaaccactctagccttagggcgtttttttaga
aaaaaccataacgaagtcaaattttttgacgaccaattcacttcatcttttaaagatagc
gagggttttgtttgctatcccagtaaggatttcaaccctaacgattcccaactagagata
gtcagccctggcatcagtttcacgcaccctttagtgataaaagccaagcatttagtgagc
gaatacgattatattgatagcttgtttgatttggttttcacgcctactataataagtatt
agcggcactaatggtaaaaccaccacgacagaaatgctcaccatgcttttagaagatttt
aaggctgtgagtggggggaatatcggcacgcccttgattgaattgtttgaaaaacaatcg
cccttatgggtgctagaaacaagctccttttctttgcactacaccaataaggcttaccct
ttaatctacttgctcatcaatgtggaagccgatcatttgacttggcattgcaattttgaa
aattatttgaacgctaaactcaaggttttaacattgatgcctaaaacttcgctcgctatc
ctccctttaaaattcaaagaacattcaagcgttcaaaactcgcaagcgcaaaaaatcttt
tttgacaaaagcgaagaggttttagagcgtttaaaaatcccttctaacgccctttttttt
aagggggcgtttttattagacgctgccttagcccttttagtttatgagcaatttttaaaa
ataaagaatttaaaatggcaagactatagagaaaacgcccttaaaaaactgaacgctttt
aaagtcggctcgcataaaatggaagaatttagggataaacaagggcgtttgtgggtagat
gacagcaaagccacgaatattgatgctaccttgcaagctctaaaaacctttaaaaaccaa
aaaatccatttgattttagggggcgatattaaaggggtcaatttaacccccctttttgaa
gaatttaaaaattatgaaataagcctttatgcgataggatcaagcgcttctatcatccaa
gccttagcgttagaatttaatgtttcttgtcgggtttgtttggagttagaaaaagcggtt
caagaaattaaaagcgttttatcgcaaaatgaaatcgctttgctttccccaagcgcggcc
agtttggatcaattttcttcgtataaagaaaggggtgaaaaatttaaagcgtttgtttta
aaagattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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