KEGG   Helicobacter pylori Shi169: HPSH169_02125
Entry
HPSH169_02125     CDS       T02038                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
hhq  Helicobacter pylori Shi169
Pathway
hhq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hhq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    HPSH169_02125 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhq03400]
    HPSH169_02125 (ruvB)
Enzymes [BR:hhq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HPSH169_02125 (ruvB)
DNA repair and recombination proteins [BR:hhq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HPSH169_02125 (ruvB)
    RecFOR pathway proteins
     HPSH169_02125 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase DUF815 Bac_DnaA TIP49 NB-ARC AAA_3 nSTAND3 AAA_2 RNA_helicase bpMoxR Sigma54_activ_2 AAA_14 MCM Rad17 DUF3738 HAMP_2 AAA_PrkA AAA_18 AAA_7
Other DBs
NCBI-ProteinID: AFH99125
UniProt: A0A0E0WCP9
Position
complement(424247..425257)
AA seq 336 aa
MKERIVNLETLDFETSQEASLRPNLWEDFIGQEKIKSNLQISICAAKKRQESLDHMLFFG
PPGLGKTSISHIIAKEMETNIKITAAPMIEKSGDLAAILTNLQVKDILFIDEIHRLSPAI
EEVLYPAMEDFRLDIIIGSGPAAQTIKIDLPPFTLIGATTRAGMLSNPLRDRFGMSFRMQ
FYSPSELALIIKKAAAKLNQDIKEESADEIAKRSRGTPRIALRLLKRVRDFALVKNSSLM
DLNITLHALNELGVNELGFDEADLAYLSLLANAQGRPVGLNTIAASMREDEGTIEDVIEP
FLLANGYLERTAKGRIATPKTHALLKIPTLNPQTLF
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgaaagaacggatagtcaatttagaaactttggattttgaaacttctcaagaagcgagt
ttgcgtcctaatctttgggaagattttatcggtcaagaaaagattaaaagcaatttgcaa
atttctatttgcgcggctaaaaaacgccaagaaagtttggatcacatgctcttttttggc
ccgcccggtttgggtaaaacttcaataagccatatcatcgctaaagaaatggaaaccaat
atcaaaatcaccgccgctcccatgatagaaaaaagcggtgatttggccgccattttgacg
aatttacaagttaaagacattctttttattgatgaaatccaccggcttagcccagcgatt
gaagaggttttatacccggctatggaagatttcaggctggatattatcataggatcaggt
ccggcggctcaaaccattaaaattgatttaccccctttcaccctcatcggcgctaccacc
agagccggaatgctctctaaccccttaagagacagatttggcatgagctttagaatgcaa
ttttatagccctagcgaactggctcttatcatcaaaaaagccgccgccaaactcaaccaa
gacatcaaagaagaaagcgctgatgaaatcgctaaaaggagtagaggcacgccaaggatt
gctttaaggcttttaaaaagggtgcgcgattttgcgttagtcaaaaattcaagcttgatg
gatttaaacatcactttgcatgctttgaatgaattaggcgtgaatgaattaggctttgat
gaagcggatttggcgtatttgtctttgttggctaacgctcaaggacgaccggtgggtttg
aacacgattgcagcatctatgagagaagatgaaggcacgattgaagatgtgattgagcct
tttttactcgctaatggttatttagagcgcaccgctaaaggcagaatcgccacgcctaaa
acccatgcgcttttaaaaatccccactttaaacccccaaactttattttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (34)   

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