KEGG   Helicobacter pylori Shi169: HPSH169_05260
Entry
HPSH169_05260     CDS       T02038                                 
Name
(GenBank) primosome assembly protein PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
hhq  Helicobacter pylori Shi169
Pathway
hhq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hhq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    HPSH169_05260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhq03400]
    HPSH169_05260
Enzymes [BR:hhq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HPSH169_05260
DNA repair and recombination proteins [BR:hhq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HPSH169_05260
SSDB
Motif
Pfam: DEAD ResIII PriA_C Helicase_C PriA_CRR AAA_19 AAA_22 PriA_3primeBD ADDB_N PhoH nSTAND3 AAA_7 AAA_30 CobU Glycos_transf_2 zf-CHY
Other DBs
NCBI-ProteinID: AFH99721
UniProt: A0A0E0WD20
Position
complement(1089746..1091605)
AA seq 619 aa
MFYHLIAPLKNKTPPLTYFSKERHQKGALVNIHLRNKMLLGVVLGEVSKPSFECLELEKT
PYFLLPFQIELAIFIAQYYSANLSSVLNLFTPFKECDLVGLEKIEPVLNALSQTQTNALK
ELQKHSASLLFGDTGSGKTEIYMHSIAQTLEQKKSALLLVPEIALTPQMQQRLKRVFKEN
LGLWHSKLSQTQKKQFLEKLYSQEIKLVVGTRSALFLPLKELGLIIVDEEHDFSYKSHQS
PMYNARDLCLYLSHKFPIQVILGSATPSLNSYKRFKDKALVRLKGRYTPTQKNIIFEKTE
RFITPKLLEALKQVIDKNEQAIIFVPTRANFKTLLCQNCYKSVQCPFCSVNMSLHLKTNK
LMCHYCHFSSPIPKICSACQNEVLVGKRIGTMQVLNELEGLLQGTKIAILDKDHTSTPKK
LHNILNDFNAQKTNILIGTQMISKGHDYAKVSLAVVLGIDNIIKSNSYRALEEGVSLLYQ
IAGRSARQISGQVFIQSTETDLLENFLEDYEDFLQYELQERCELYPPFSRLCLLEFKHKN
EEKAQQLSLKASQTLSSCLEKGVTLSSFKAPIEKIASSYRYLILLRSKNPLSLIKSVHAF
LKTAPNIPCSVNMDPVDIF
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgttctatcacttgatcgctcctttaaaaaataaaaccccccctttaacttacttttct
aaggagcggcaccaaaaaggagcgttagtcaatatccatttaaggaataaaatgcttttg
ggcgtcgttcttggagaagtttcaaaaccctcttttgaatgcctagaactagaaaaaacc
ccttattttttactcccctttcaaatagagctcgctatatttatcgctcaatattactcg
gctaatctttcttcagtcttaaatctttttaccccttttaaagaatgcgatttggtgggg
ttagaaaaaattgagcccgttcttaatgcgttaagccaaacgcaaacaaacgctttaaaa
gaattgcaaaaacattcagcaagcctgctctttggcgatacgggtagcgggaaaaccgag
atttatatgcattcaatcgctcaaactttagagcaaaaaaaaagcgctttattgttagtg
ccagaaatcgccctcacccctcaaatgcaacaacgccttaaaagggtctttaaagaaaat
ttaggcttgtggcatagcaaactctctcaaacccaaaaaaaacaatttttagaaaagctt
tattcgcaagaaatcaaattagtggtaggcacacgaagcgcgttgtttttaccccttaag
gagttgggtttaatcattgtagatgaagagcatgacttttcttataaatcccatcaaagc
cctatgtataacgctagggatttatgcttgtatttatcccataaattccctattcaagtg
attttaggctctgctacgccaagtttaaatagttacaaacgctttaaagataaggcttta
gtgcgcttaaaggggcgctacacgcctacgcaaaaaaacattatttttgaaaaaaccgag
cgttttatcacgcccaaactcctagaagcgctaaaacaagttatagacaaaaacgagcaa
gccattatttttgtgcctacaagggctaatttcaaaaccttgctgtgtcaaaattgttac
aaaagcgttcaatgccccttttgcagcgtgaatatgagtttgcatttaaaaaccaacaaa
ctcatgtgccattattgccatttttcaagccctatccctaaaatttgcagcgcgtgtcaa
aacgaagttttagtgggtaaaaggataggcaccatgcaagtgttaaacgagttggaaggc
cttttgcaaggcactaaaatagccattttagataaagatcataccagcacgccaaaaaaa
ctccacaatattttaaacgatttcaacgctcaaaaaaccaatatcttaatcggcactcaa
atgataagcaaagggcatgattacgctaaagtgagtttagcggttgttttaggcatagac
aatatcattaaatccaatagttacagggctttagaagaaggcgtgtcattactttatcaa
atcgctgggaggagcgctaggcaaatttctggccaagtgttcattcaaagcaccgaaacg
gatctattagaaaatttcttagaagattatgaagattttttacaatacgaattgcaagaa
aggtgcgaactctacccgcctttttcaaggctgtgtttgttagagtttaagcataaaaac
gaagaaaaagcccaacaattgagcctaaaagcctctcaaaccctttcttcgtgtttagaa
aagggtgtaacgctctctagctttaaagcccccattgaaaaaatcgcttcttcttatcgc
taccttattttgttgcgttccaaaaatcctttaagcctaatcaaaagcgtgcatgcgttt
ttaaaaaccgcccccaatatcccttgcagcgtgaatatggatcctgtggatattttttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (26)   

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