KEGG   Helicobacter pylori Shi417: HPSH417_03185Help
Entry
HPSH417_03185     CDS       T02039                                 

Gene name
gatB
Definition
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
hhr  Helicobacter pylori Shi417
Pathway
hhr00970  Aminoacyl-tRNA biosynthesis
hhr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hhr00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HPSH417_03185 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:hhr03029]
    HPSH417_03185 (gatB)
Enzymes [BR:hhr01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     HPSH417_03185 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     HPSH417_03185 (gatB)
Mitochondrial biogenesis [BR:hhr03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    HPSH417_03185 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey VAPB_antitox HcyBio
Motif
Other DBs
NCBI-ProteinID: AFH97788
Position
651097..652521
Genome map
AA seq 474 aa AA seqDB search
MPFEAVIGLEVHVQLNTKTKIFCSCSTSFGESPNSNTCPVCLGLPGALPVLNKEVVKKAI
QLGTAIEANINQYSIFARKNYFYPDLPKAYQISQFEVPIVSDGKLEIDTKEGAKIVRIER
AHMEEDAGKNIHESSYSLVDLNRACTPLLEIVSKPDMRNSEEAIAYLKKLHAIVRFIGIS
DANMQEGNFRCDANVSIRPKGDEKLYTRVEIKNLNSFRFIAKAIEYEIERQSAAWESGRY
HKEVVQETRLFDTNKGITLSMRNKEESADYRYFKDPDLYPVFIDEKLLKEAQKINELPSA
KKIRYMKDFNIKEDDANLLASDPLLAEYFESMLDLGVKAKTSVTWLCVELLGRLKAEITL
ENCGVSAHMLGVLAKRIDEGKISGKSAKDVLDRLLEEQGGDVDALIEQMGLSQVNDTETI
VKVIEEVLKNNADKVLEYKSGKDKLFGFFVGQAMKNLKGANPSVVNAILKEKLD
NT seq 1425 nt NT seq  +upstreamnt  +downstreamnt
atgccatttgaagctgtaatcgggctagaagtccatgtccaactcaacactaaaaccaaa
atcttttgctcttgctctacaagctttggagaatcccctaattctaacacttgccctgtg
tgtttgggcttaccgggagctttgccggtattgaataaagaagtggttaaaaaagccatc
caattaggcacagccattgaagccaacatcaaccaatattccatttttgcaaggaaaaat
tatttttaccctgatttgcctaaggcttatcaaatttcgcagtttgaagtccctattgtg
agcgatgggaaattagagattgacactaaagagggtgcaaaaatcgtgcgtattgaaaga
gcccacatggaagaagacgccggtaaaaatatccatgagagtagctattctttagtggat
ttgaaccgcgcttgcacccctttattagaaattgtcagtaagccggacatgcgaaatagt
gaagaagccatagcgtatttgaaaaagctccatgctatcgtgcgttttatagggatttct
gatgcgaacatgcaagaggggaatttcaggtgcgatgcgaatgtgtccattagacccaaa
ggcgatgaaaagctttacacgagagtggagattaaaaacttaaatagctttagattcatc
gctaaagcgattgaatacgagatagagcgccaaagcgcggcgtgggaaagcgggcgttat
cataaagaagtggttcaagaaacgcgcctttttgacactaataaagggatcaccctttct
atgcgcaataaagaagaatcagcggattaccgctattttaaagatccggatttgtatcct
gtttttattgatgaaaaacttttaaaagaagctcaaaagatcaatgaattgcctagcgcg
aaaaaaatccgctacatgaaagattttaatattaaagaagacgatgcgaatttattggcg
agcgatcctttattggcagagtattttgaaagcatgctcgatcttggggttaaggctaaa
acgagcgtaacatggctttgcgtggaattattagggcgcttgaaagccgaaatcacttta
gaaaattgcggagttagcgctcacatgttaggcgttttagccaaacgcattgatgagggc
aagatttctggcaagagcgctaaagatgtgttagacaggcttttagaagagcaagggggc
gatgtggatgcgctcattgaacaaatgggcttgtctcaagtcaatgacacagaaacgatt
gttaaagtgatagaagaggtgcttaaaaacaacgctgataaggtgcttgaatacaaaagc
ggtaaggacaagctttttgggttttttgtggggcaggcgatgaaaaatttaaaaggcgct
aatcctagcgtggtgaatgctattttgaaagagaaattggattga

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