KEGG   Helicobacter pylori Shi417: HPSH417_04045
Entry
HPSH417_04045     CDS       T02039                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
hhr  Helicobacter pylori Shi417
Brite
KEGG Orthology (KO) [BR:hhr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hhr03032]
    HPSH417_04045
   03036 Chromosome and associated proteins [BR:hhr03036]
    HPSH417_04045
   03400 DNA repair and recombination proteins [BR:hhr03400]
    HPSH417_04045
DNA replication proteins [BR:hhr03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    HPSH417_04045
Chromosome and associated proteins [BR:hhr03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    HPSH417_04045
DNA repair and recombination proteins [BR:hhr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      HPSH417_04045
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 DUF2267 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: AFH97949
Position
822641..822925
AA seq 94 aa
MNKAEFIDLVKEAGKYNSKREAEEAINAFTLAVETALSKGESVELIGFGKFETAEQKGKE
GKVPGSDKTYKTEDKRVPKFKPGKILKQKVEEGK
NT seq 285 nt   +upstreamnt  +downstreamnt
atgaacaaagcggaatttattgatctggttaaagaagcgggtaaatacaacagcaaaaga
gaagccgaagaagcgatcaacgcctttactctagcggtagaaacggctttaagcaagggt
gaaagcgtggaattgattggttttggcaaatttgagaccgcagaacaaaaaggcaaagaa
ggtaaagtgccaggaagcgataaaacttataaaactgaagacaagcgagtgcctaaattc
aaacccggcaaaatccttaaacaaaaagttgaagaaggcaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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