KEGG   Helicobacter pylori Shi417: HPSH417_07775
Entry
HPSH417_07775     CDS       T02039                                 
Name
(GenBank) site-specific DNA-methyltransferase
  KO
K00558  DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
Organism
hhr  Helicobacter pylori Shi417
Pathway
hhr00270  Cysteine and methionine metabolism
hhr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hhr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    HPSH417_07775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hhr03000]
    HPSH417_07775
   03032 DNA replication proteins [BR:hhr03032]
    HPSH417_07775
   03036 Chromosome and associated proteins [BR:hhr03036]
    HPSH417_07775
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hhr02048]
    HPSH417_07775
Enzymes [BR:hhr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.37  DNA (cytosine-5-)-methyltransferase
     HPSH417_07775
Transcription factors [BR:hhr03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    HPSH417_07775
DNA replication proteins [BR:hhr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   DNA methylation enzymes
    HPSH417_07775
Chromosome and associated proteins [BR:hhr03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    HPSH417_07775
Prokaryotic defense system [BR:hhr02048]
 Restriction and modification system (R-M system)
  Type II R-M system
   DNA methyltransferases
    HPSH417_07775
SSDB
Motif
Pfam: DNA_methylase Dicers_N PK
Other DBs
NCBI-ProteinID: AFH98667
Position
complement(1612141..1613397)
AA seq 418 aa
MVYNICEFFVGAGGSHLGFIQQGFKTLYVNDIDKDALKTLLHNNKELKDAIIDQTSITEI
DPKKLQTQIKQEVDVIFAGIVCKSFSLAGERSPNDKRNYFYHYYLEIIKTLRPEISIIEN
VKGMLNAKILPQNSDPKILQEVDILYQELENYKGKKAELRKKNSITKEFENYGLNLRQKK
QNLQKKLNDLMHGVVDDILKIYEELGYRVEFKILNSAWYGSATKRERLIIVAIRNDLPFN
FTFPKPTHLSDEINTKLDFKDLPTSFKKPFLIRDAFNLIDYSNSDDTDNLSMQHNPKTIE
RFKYIQEGKNIQECIESLPKHLQISKFYSRGNTMRLKMDALSPTLVPGHSNFPLHPTEHR
SITIREAATITGFPISYKFFGSHTKRCEQVGNAVPIALSSAIAKEVKRFLDSLKPKTI
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggtatataatatttgtgaattttttgtaggagcgggcggttcgcatttaggttttatc
caacaaggttttaaaacgctctatgttaatgatatagacaaagacgccctaaaaacttta
ctccataacaataaagaattaaaagatgccatcatagatcaaacaagcattacagaaatt
gaccctaaaaaattacaaacacagataaaacaagaggttgatgttatttttgctggcatt
gtgtgcaaaagtttttccttagctggggagcgctcgcctaatgataaacgcaattatttt
taccactactatttagaaatcatcaaaaccctaagaccagaaatcagcattatagaaaat
gtcaaaggcatgttaaacgctaaaattttgccgcaaaattcagaccctaaaattttacaa
gaagtggatattttataccaagagttagaaaactataagggcaaaaaagcagagttaaga
aaaaagaattctatcactaaggaatttgaaaattacggcttaaatttacgccaaaagaaa
caaaacttgcaaaagaaactcaatgatttaatgcatggcgttgtagatgacattttaaaa
atttatgaagaattaggctatcgtgtagaatttaaaatcttaaatagtgcatggtatggg
agtgcgactaaaagagaaaggttgattatagtagctattagaaacgatttaccctttaat
tttacattccctaaacccacccatttaagcgatgaaatcaatactaagctagattttaaa
gatttacccacaagctttaaaaaaccttttttgattagagacgcttttaatttgattgat
tattccaattcagacgatacagacaatttgtccatgcaacacaaccctaaaacaattgag
cgctttaaatacatacaagaaggcaaaaatatccaagaatgcattgagagtttgcctaag
catttacaaatctctaaattctattctagaggcaataccatgcgtttaaaaatggacgcc
ttatctcctactttagtgccagggcatagtaatttccccttacacccaacagagcataga
agcatcaccattagagaagcagcaaccattaccggctttcctatttcttacaaatttttt
ggctcacacaccaagcgttgcgaacaagtgggcaatgctgtgcctattgctttatccagc
gcgattgctaaggaagttaaaagatttttagatagtttaaaaccaaaaactatctaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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