KEGG   Helicobacter pylori Shi417: HPSH417_07820
Entry
HPSH417_07820     CDS       T02039                                 
Symbol
secD
Name
(GenBank) preprotein translocase subunit SecD
  KO
K03072  preprotein translocase subunit SecD
Organism
hhr  Helicobacter pylori Shi417
Pathway
hhr03060  Protein export
hhr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hhr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HPSH417_07820 (secD)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HPSH417_07820 (secD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hhr02044]
    HPSH417_07820 (secD)
Secretion system [BR:hhr02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HPSH417_07820 (secD)
SSDB
Motif
Pfam: SecD_1st SecD_SecF ACR_tran MMPL Sec_GG
Other DBs
NCBI-ProteinID: AFH98674
Position
1621153..1622730
AA seq 525 aa
MKLFNPRLIVFICALLLGVGFSVPSLLETKGPKITLGLDLRGGLNMLLGVQTDEALKNKY
LSLASALEYNAKKQNILLKDIKSSLEGISFELLDEDEAKKLDVLLVELQGHSQFEIKKEV
EFYSVKLTPLEQEELRKNTILQVIGIIRNRLDQFGLAEPIVIQQGKEEISVQLPGIKTLE
EERRAKELISRSAHLQMMAVDEEHNKDAMKMTDLEAQKLGSVLLSDVEMGGKILLKAIPI
LDGEMLTDAKVVYDQNNQPVVSFTLDAQGAKIFGDFSGANVGKRMAIVLDNKVYSAPVIR
ERIGGGSGQISGNFSVAQASDLAIALRSGAMSAPIQVLEKRIIGPSLGKDSIKTSIIALV
GGFILVMGFMVLYYSMAGVIACMALVVNLFLIVAVMAIFGATLTLPGMAGIVLTVGIAVD
ANIIINERIREVLRENEGIAKAIHLGYINASRAIFDSNITSLIASVLLYAYGTGAIKGFA
LTTGIGILASIITAIVGTQGIYQALLPKLTQTKSLYFWFGVNKRA
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgaaactttttaaccctcgcttaatcgtttttatttgcgcgcttcttttaggggtaggg
ttttctgtgccttctttgctagagactaaaggccctaaaatcactctaggtttggattta
aggggggggttaaacatgcttttaggggtgcaaaccgatgaggctttaaaaaacaagtat
ttaagcttggcgtccgctttagaatacaacgctaaaaagcaaaatatcttgcttaaagac
attaaatccagtctagaagggatcagttttgagcttttagatgaagatgaagcgaaaaaa
ttagacgtgcttttagtggaattgcaaggtcatagccagtttgaaatcaaaaaagaagtg
gaattttatagcgtgaagctcacccctttagagcaagaggaattgcgtaaaaacacgatt
ttgcaagtgatagggatcattcgtaaccgcttggatcaatttggtttggcagagcctata
gtcattcagcaaggtaaagaagaaatttcggtgcaattgcccggtattaagactttagaa
gaagaacggcgcgctaaagaattgatttctcgatccgctcatttgcagatgatggcagtg
gatgaagaacacaataaagatgcgatgaaaatgacggatttagaggctcaaaaattaggc
agcgtgttgttatcggatgtggaaatgggtggtaaaatcttgctcaaagcgatccccatt
ttagatggcgaaatgcttacagatgcgaaagtagtgtatgatcaaaacaaccagccggtg
gtgagcttcacgctagatgcgcaaggggctaagatttttggggatttctcaggcgcgaat
gtgggcaaacgcatggcgattgttttagacaataaggtctattcagccccagtgatcaga
gagcgtattggcggagggagtgggcaaattagcgggaattttagcgtggctcaagcgagc
gatttagcgatcgctttaaggagtggggcaatgagtgctcccattcaggttttagaaaaa
aggattataggcccgagtttagggaaagacagcattaaaacttccattatcgctctggtt
gggggctttattttggtgatgggctttatggtgctttattactctatggcgggggtgatc
gcttgcatggcgttagtggtcaatctttttttgattgtggcggtcatggcgatttttgga
gcgactctgactttaccgggaatggcggggattgttttaaccgtggggattgctgtggat
gctaatatcattatcaacgaacgcattagagaggttttaagagagaatgaaggcatcgct
aaggcgatccatttaggctatatcaatgcgagccgggcgatttttgattccaatatcact
tctttgatcgcttcagtgttattatacgcttatggcacaggagcgattaaaggctttgcc
ctaaccacaggcattgggattttggcctctattattaccgctattgtaggcacgcaaggg
atttatcaagcccttttacctaaactcacccaaacaaaaagcctttatttttggtttggc
gtgaataaaagagcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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