KEGG T04039: F506

Herbaspirillum hiltneri: F506_11520

Entry

F506_11520        CDS       T04039

Name

(GenBank) DNA polymerase III

K21929

uracil-DNA glycosylase [EC:3.2.2.27]

Organism

hht Herbaspirillum hiltneri

Pathway

hht03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:hht00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    F506_11520
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hht03400]
    F506_11520
Enzymes [BR:hht01000]
3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     F506_11520
DNA repair and recombination proteins [BR:hht03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     F506_11520

SSDB

Motif

Pfam:

UDG

Other DBs

NCBI-ProteinID:

AKZ63213

Position

2525013..2525936

AA seq 307 aa
MSQSTFAASARVLEEIGVGPVWVRRHLAVEAAEPEAEVAAAASAPAQAPAPALAQPKPAQ
PDAHPAPASRPVPAQDDGLPPWLSEMNEADMAPPGFMPYDEEDDEPAVRINPAIATMDWS
KLKETVAECRQCGLCNGRKKTVFGVGDEKARWLFIGEGPGRNEDAQGEPFVGPAGKLLDN
MLVAMGLKRGENAYIANIVKCRPTDEGGKDRPPSPQEVASCLPYLQRQIALIQPTVLVAL
GKTAALSLLGLDPATPVSKLRGTVHRYQDLPLVVTYHPAYLLRQLGDKSKAWADLCLAMT
TYADTSD

NT seq 924 nt +upstreamnt +downstreamnt
atgagtcagagtacatttgccgcttcggcccgagtcctggaagaaatcggcgtcggtccg
gtctgggtccggcgccaccttgccgtcgaggccgccgagccggaagccgaagtcgccgcg
gctgcatcggcgcccgcacaggccccggcacctgcattggctcagccgaaacctgcgcaa
ccggatgcacatccggcgccggcttcccgtcccgtgccggcgcaagacgacggcttgccg
ccctggctgagcgaaatgaatgaagccgacatggcgccccccggtttcatgccctatgac
gaggaggacgacgaacccgccgtcagaatcaatccggccatcgccacgatggattggagc
aagctcaaggaaaccgttgcggagtgccgccagtgcggcttgtgcaacggacgcaagaag
accgtcttcggcgtcggcgatgaaaaggccaggtggctgttcatcggcgaaggcccgggg
cgcaacgaggatgcacagggtgaaccattcgtcggtccggccggcaaactgctcgacaac
atgctggtcgccatgggcctcaagcgcggcgagaatgcttatatcgccaacatcgtcaaa
tgccgtcccaccgacgaaggcggcaaggatcgtccgccatcgccgcaagaagtggcgtcc
tgcctgccgtacctgcagcgccagatcgcactgatccagccgaccgtgttggtggcgctc
ggtaagacggccgcactgtcgctgctcggcctggatcccgccacccccgtttccaaattg
cgcggcaccgtacatcgctatcaggacctgccgctggtcgtgacttaccacccggcttat
ctgttgcggcagcttggcgacaagagcaaggcctgggccgatctctgccttgcgatgacc
acttatgccgacacttcagactga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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