KEGG   Herbaspirillum hiltneri: F506_15170
Entry
F506_15170        CDS       T04039                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
hht  Herbaspirillum hiltneri
Pathway
hht03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hht00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    F506_15170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hht03400]
    F506_15170
Enzymes [BR:hht01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     F506_15170
DNA repair and recombination proteins [BR:hht03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     F506_15170
SSDB
Motif
Pfam: Exo_endo_phos PB2_cap-binding
Other DBs
NCBI-ProteinID: AKZ63826
Position
3320408..3321175
AA seq 255 aa
MKKIATWNVNSLKVRLPQVLQWLGDNPVDVLCLQETKLTDDKFPQAEINAAGYEVVFSGQ
KTYNGVAILSRHPITDVVKNNPLFEDEQQRIIAATIEGVRYVCAYIPNGQAPDSEKYQYK
LKWLAALHEWLAQEQLLHPRLALLGDYNIAPEDRDVHDPAAWVGQNLVSEPERAAFFHLE
KMGFTDAFRKFEQPEKLYSWWDYRQMGFRLNKGLRIDHILLTAPLAAQCTACVIDKVPRK
WEQPSDHAPVVATLD
NT seq 768 nt   +upstreamnt  +downstreamnt
atgaaaaaaatcgccacctggaacgtcaactccctgaaagtccgcctgccccaggtattg
caatggctgggcgacaatccggtcgacgtgctgtgcctgcaggaaaccaagctcaccgac
gacaagttcccgcaggccgaaatcaacgccgccggttacgaagtggtgttcagcggacag
aagacctacaacggggtggctatcctgtcgcgccatccgatcaccgacgtggtcaagaac
aatccgctgttcgaagatgaacagcaacgcatcattgcggcgaccatcgaaggcgtgcgt
tacgtctgcgcctatattcccaacggccaggcgccggattcggagaaataccagtacaag
ctgaaatggctggccgcgctgcacgagtggctggcgcaagaacaattgctgcatccccgg
ctggccctgctgggcgactacaacatcgcgccggaagatcgcgacgtccacgacccggct
gcctgggtcggccagaacctggtgtcggaaccggagcgcgcggcgttcttccatctcgaa
aagatgggcttcaccgatgccttccgcaagttcgagcaaccagaaaagctctacagctgg
tgggactatcgccagatggggttccgattgaacaagggcctgcgcatcgaccatatcctg
ctgaccgcgccgctggcggcgcagtgcacggcgtgcgtgatcgacaaggtaccgcgcaag
tgggaacagccttcggaccatgcgccggtggtggccacgctcgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system