KEGG T05971: NCTC503

Hathewaya histolytica: NCTC503_00006

Entry

NCTC503_00006     CDS       T05971

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

hhw Hathewaya histolytica

Brite

KEGG Orthology (KO) [BR:hhw00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hhw03032]
    NCTC503_00006 (gyrB)
   03400 DNA repair and recombination proteins [BR:hhw03400]
    NCTC503_00006 (gyrB)
Enzymes [BR:hhw01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     NCTC503_00006 (gyrB)
DNA replication proteins [BR:hhw03032]
Prokaryotic type
  DNA Topoisomerases
   NCTC503_00006 (gyrB)
DNA repair and recombination proteins [BR:hhw03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      NCTC503_00006 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 GyrB_hook

Other DBs

NCBI-ProteinID:

VTQ81465

UniProt:

A0A4U9QSI9

Position

1:4110..6017

AA seq 635 aa
MDNNQIYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALAGYCNNI
EIKIDKNDTVTVKDDGRGIPVGMHPKIKKPTLEVIMTVLHAGGKFGGNGYKVSGGLHGVG
ASVVNALSKKCMVEVKRDGNLYRQIYEYGKVMTDVEIVGASEGQGTTTYFEPDPDIFDEV
NFDYEILSKRLREIAFLNKGIRIILNFEKEDKLTEFHYEGGIKSFVEYLNRNKQVLHKDP
IYIEGEKGDSVVELALQYNDSYSENIFSFANNIDTIEGGSHLSGFKTALTRVLNDYAKKF
GFLKESDKNLSGEDIREGLTAVVSVKLTNPQFEGQTKTKLGNSEMRGIVDSILSEALWAS
LEENPQIAKIVVDKALSAARAREAARKARELTRRKSILESTSLPGKLSDCSSKNPDECEI
YLVEGDSAGGSAKQGRNREFQAILPLKGKIMNVEKQRLDKMLNSDEIRSLITAIGAGIGK
DFDISKIRYSRIIIMTDADVDGAHIRTLLLTFFYRYMKDIVEAGHIYIAQPPLYKIKKGK
KEYYSYNDKELETMLLELGGKDRNTEIQRYKGLGEMDAEQLWDTTMNPEERILLQVTVED
AMAADEIFTVLMGDKVEPRREFIQENAKQVVNLDI

NT seq 1908 nt +upstreamnt +downstreamnt
atggataataatcaaatttatgatgaaagtcagatacaggtattggaaggtcttgaagct
gtaagaaaaagaccaggtatgtatataggtagtaccagtttaagaggtttgcaccattta
gtttatgaaatagttgataatagtatagacgaagctctagcaggttactgtaataatata
gaaatcaaaatagataaaaatgatacagttaccgtaaaagatgatggaagaggaatacca
gtaggtatgcatcctaaaataaagaaaccgactctagaggttatcatgaccgtacttcat
gctggaggtaagtttggaggaaatggttataaggtttctggaggattacacggggtaggt
gcatctgtagttaatgcactttctaaaaaatgtatggtagaagtaaaaagagatggtaac
ctatatagacaaatctatgagtatggaaaagttatgactgatgtagagattgtaggtgca
tcagaaggtcaaggtacaactacttactttgaaccagatccggacatttttgacgaggta
aactttgactatgaaatattaagcaaaagattaagagaaattgcctttttaaataaaggt
attagaataatattaaactttgaaaaggaagataaattaactgaatttcactatgaaggt
ggaataaagtcttttgtagagtacctaaatagaaataaacaagttctgcacaaagaccct
atatatatcgaaggtgaaaagggagatagtgtggtagagcttgctctccaatacaatgac
tcctatagtgaaaacatattttcttttgcaaacaatatagatacaatagagggtggatca
catttatcaggatttaaaactgctcttacacgtgtcttaaatgattatgcaaagaaattt
ggctttttaaaagagagtgataaaaacttatccggagaagatataagagaaggattaacg
gctgtagtttcagtaaaacttactaatcctcagtttgaaggtcaaacaaaaactaaatta
ggaaatagtgagatgcgtggtattgtggatagtatactaagtgaggctttatgggctagt
ttagaagaaaatccgcaaatagcaaaaattgtagttgacaaggctttaagtgcagcaaga
gcaagagaagctgcaagaaaggcaagagaacttacaaggcgtaaatctatacttgaaagt
acatcattaccagggaaactttcagattgttcatctaaaaaccctgacgagtgtgaaata
tatctagtagagggagactctgcgggtggttctgcaaaacagggcagaaacagagaattt
caagctatattaccacttaagggtaaaataatgaatgttgaaaaacaaagacttgataaa
atgttaaactctgatgaaataaggtctttaattacagctattggtgctggtataggaaaa
gactttgatatatccaaaataagatatagcagaataataattatgactgatgccgatgtt
gacggagctcatattagaacattattgcttacattcttctatagatacatgaaagatata
gtggaagcaggtcatatttatatagcacagccaccactatataaaattaaaaaaggaaag
aaagagtattattcttacaatgacaaagagctagaaactatgttgctagagcttggtggt
aaagataggaatacagaaattcaaagatacaagggtcttggagaaatggacgcagaacaa
ttgtgggatacaactatgaatccagaagaaagaatacttcttcaagttactgtagaagat
gctatggctgcagatgaaatattcacagttttaatgggtgacaaggtagaaccacgtagg
gaatttatacaggaaaatgctaaacaagttgtaaacttagatatttag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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