KEGG   Hathewaya histolytica: NCTC503_01197
Entry
NCTC503_01197     CDS       T05971                                 
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
hhw  Hathewaya histolytica
Pathway
hhw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hhw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    NCTC503_01197 (xseA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhw03400]
    NCTC503_01197 (xseA)
Enzymes [BR:hhw01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     NCTC503_01197 (xseA)
DNA repair and recombination proteins [BR:hhw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     NCTC503_01197 (xseA)
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon RecJ_OB SSB
Other DBs
NCBI-ProteinID: VTQ88180
UniProt: A0A4U9RHD0
Position
1:1219899..1221098
AA seq 399 aa
MLIKVLTVSNLNNYIKKSFDNDVILNNVYVKGELSNFKVHSSGHIYFSIKDSGSKLNCIM
FRDYANTLKFTPKEGDKVVVKGRVSVYEKEGYYQLYAREIELEGIGELYYEFNLLKEKLK
EEGLFEERHKKALPLYPKRIGVITSPTGAAVRDIINVSLRRNPKTNILIYPSLVQGDSAP
ENLIKGIKYLNNMEDIDLIILARGGGSIEELWAFNNEKLAYAIHNSKKPIISGVGHETDF
TISDFVSDMRAATPSAAAEIAVPSYTELKDRIFNLTLNLNNNIVFKLREEKDKVSIVLHK
LKLQSPKSYIVNQYEYIDFLISKLNNNIDFNIGLEKENLIKNVSLLDAHNPYNVLKRGYS
ILQDKNFNIINSKEQLSKEKEVLITLKDGKIKLKIEVVE
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgttaattaaagttttaacagtttcaaatttaaacaactatattaaaaagtcttttgat
aatgatgttatcctaaataatgtttatgttaaaggtgaactatctaattttaaagttcac
agtagtgggcatatatatttttctataaaagattctggctccaaattgaattgtataatg
ttcagagactatgcaaatactttaaagttcactccaaaagaaggggataaagtagttgta
aagggaagggtttcagtctatgaaaaagaaggatattatcagttatatgcaagagagatt
gaacttgagggcatcggagaactttattatgagttcaatcttttaaaagaaaaattaaag
gaagaaggcctttttgaagaaagacataaaaaagcattacctctatatccaaagcgtata
ggggtaataacttcccctacaggagcagccgtaagggatattattaatgtttcattaagg
agaaatccaaagacaaatatcttaatatatccatcccttgttcaaggtgattcagctcca
gaaaatttaattaaaggtataaaatatttaaataatatggaagatatagaccttataata
ctggcaagaggtgggggctctattgaagaattgtgggcatttaacaatgaaaaattagcc
tatgcaatacataactctaaaaagcccataatttctggagtaggtcacgaaacagatttt
acaatttcagattttgtaagtgacatgagagcagcgactccttcagcagcggcagaaata
gcagtgccatcctatacggaattaaaagatagaatttttaatttaactcttaatttaaat
aacaatatagtatttaaattaagagaggaaaaggataaggtaagcatagtattacacaaa
ttaaaattacaaagtcctaaatcatatatagtaaatcaatatgaatatatagatttctta
ataagcaaacttaataataatatagatttcaatatagggttagagaaagaaaatttaatt
aaaaatgtatccttattagatgcacataatccatacaatgtacttaaaagaggatactct
attttgcaagataagaattttaatataattaatagcaaagagcaattatctaaagaaaaa
gaggttttgataactttaaaagatggaaaaattaagcttaaaatagaggtggtggaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system