KEGG   Hathewaya histolytica: NCTC503_01716
Entry
NCTC503_01716     CDS       T05971                                 
Symbol
dbpA
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
hhw  Hathewaya histolytica
Pathway
hhw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hhw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCTC503_01716 (dbpA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hhw03019]
    NCTC503_01716 (dbpA)
   03009 Ribosome biogenesis [BR:hhw03009]
    NCTC503_01716 (dbpA)
Enzymes [BR:hhw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     NCTC503_01716 (dbpA)
Messenger RNA biogenesis [BR:hhw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     NCTC503_01716 (dbpA)
Ribosome biogenesis [BR:hhw03009]
 Prokaryotic type
  rRNA helicases
   NCTC503_01716 (dbpA)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 AAA_19 Adenosine_kin Terminase_6N Flavi_DEAD UvrD-helicase
Other DBs
NCBI-ProteinID: VTQ90996
UniProt: A0A4U9RI85
Position
1:complement(1687323..1688735)
AA seq 470 aa
MNRFEEFNLDKKILKSIQDIGYKNPSEVQIKAIPGILAGKDLIVKSQTGSGKTAAFSIPI
IENIEIEKNEIQALILTPTRELAVQVMDEINSLGLYKKVRAISLYGKQPMKVQRNQLSQR
VHIAVGTPGRVMDHIEKGNLHINNIKYFVIDEADEMLNMGFIEQVEDIINTLPKNRQTLM
FSATFSEEIKKIVKYHMINPEIVEINSEKLTVDKINQLYYEVREEDKIRLLKDIFKLKEI
NQGIIFCRTKKNVTSLFLDFKKEGYSICEIQGDMEQKDRLKALKDFKEGRYVFIVATDVA
SRGIDVSGVTHVINYDIPLELESYVHRIGRTGRAGNKGEAITFVTPYEQKFLKGIEEFIN
YNIPKEFPPSKEELEKANNTIQKRVIKKNTPSFEVVKITISSGKKKKTRRGDIVGVLAKD
IGIPADSIGVIDIFDNYSNVDILNGFAEKVLKNKEINIKGKPVKLYKSKE
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgaatagatttgaagagtttaatttagataaaaagatattaaaaagcatacaggatata
ggatataagaatccttccgaagttcaaattaaagctataccaggaatattagcaggaaaa
gatttaatagtaaaatcacaaaccggtagtggaaaaacagcagcattttctattccaatt
atagaaaacattgaaattgagaaaaatgaaattcaagctttaattttaacacctacaagg
gaactagctgttcaagttatggatgagataaattctcttggtctatataagaaagtgagg
gctatttcactatatggtaaacaacctatgaaagttcaaagaaatcaactttctcaaagg
gttcacatagcagtaggaactccaggaagagtgatggatcatatagagaaaggtaactta
catataaataatataaagtattttgttatagatgaagcagatgaaatgcttaatatggga
tttatagaacaagttgaagatattataaatactttacctaagaatagacaaacacttatg
ttttctgctacattttctgaggaaataaaaaaaattgtgaaatatcatatgataaatcca
gagatagttgagataaattctgaaaaacttactgtggataagataaatcaactttattat
gaggttagggaagaagataagataaggctattaaaggatatttttaaattaaaagaaatt
aatcaaggtatcatattttgcagaacaaagaaaaatgttacaagtctttttttagatttt
aaaaaagaaggatattctatttgcgaaattcagggagatatggaacaaaaagatagactt
aaggcattaaaagattttaaagaaggtagatatgtttttattgtagctacagatgtagcc
tcaagaggaattgatgtaagtggtgttactcatgttataaattatgatattcctttagaa
ttagaatcttatgttcatagaataggtcgaactggaagagcgggcaataaaggtgaagct
ataacttttgttactccttatgaacaaaaattcttaaaaggcatagaggaatttataaat
tataatattccaaaagaattcccccctagtaaggaagagttagagaaggcaaataataca
atacaaaagagagtaatcaaaaaaaatacgccttcttttgaagtagttaaaataacaatt
agtagtggaaaaaagaaaaagacacgtagaggtgatattgtaggagttttagctaaagat
ataggaataccagcggatagtataggtgttattgatatttttgataattatagtaatgtt
gatatattaaatggttttgcagaaaaagtacttaaaaataaagaaattaatataaaagga
aaacctgttaaactttataaaagtaaggaatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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