KEGG   Haemophilus influenzae F3031 (nontypeable): HIBPF_00540
Entry
HIBPF_00540       CDS       T01395                                 
Name
(GenBank) UvrABC system protein C
  KO
K03703  excinuclease ABC subunit C
Organism
hif  Haemophilus influenzae F3031 (nontypeable)
Pathway
hif03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HIBPF_00540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hif03400]
    HIBPF_00540
DNA repair and recombination proteins [BR:hif03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HIBPF_00540
SSDB
Motif
Pfam: UvrC_RNaseH_dom HHH GIY-YIG HHH_5 UVR HHH_2 HHH_3 WKF EMP70
Other DBs
NCBI-ProteinID: CBY80320
Position
complement(53036..54865)
AA seq 609 aa
MFNYKKFLADVSHEPGVYRMYDDKDQVIYVGKAKDLKKRLSSYFRKNLSSKKTEALVASI
HHIDTMLTSSETEALLLEHNFIKLYQPRYNVLLRDDKSYPFILLTKERHPRITSYRGSKK
FAGEYFGPYPHAGAVRETLSLLQKLFPVRQCENSVYSNRSRPCLQYQIGRCSAPCVQGYV
SDEEYNQQVELARLFLQGKDQQVLDYLIGKMEQASRNLGFEQAARYRDQIQAVRSVIEKQ
FVSNERLDDMDIMSIAYQHGLACVQVMFIRQGKVLGNRSYFPKVPANTDLSELTETFVGQ
FYLQGHQGRSIPNSIIVDRQLAEKSELEQLLSEQAGRKVTIQESVKGDKSKYLQLAQVNA
KAALNVQFKQSSRMSARYQALCDLLNLPEIKRMECFDISHTMGNQTVASCVVFNQEGPLK
SDYRRFNIEGITGGDDYAAMEQALQKRYERNLEEDKIPDIIFIDGGKGQLNRALNVFQHL
QVKWDKNRPHLIGVAKGVARRAGQEVLIISKQDREIHLPDDSLALHLIQHIRDESHNHAI
SGHRKKRQKAFTQSGLETIEGVGAKRRQALLKYLGGLQGVKKATLDEIASVPGISPKLAE
RIFETLKND
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgttcaattacaaaaaattcctcgctgatgtctctcacgaacctggtgtttatcgtatg
tatgacgataaagatcaggttatttatgttgggaaagcaaaggatctaaaaaaacgtctt
tcaagctattttcgtaaaaatctgagtagtaaaaaaacagaggcgttggtggcatcaatt
catcatattgacaccatgctaacttcatctgaaacggaagctttactgctagagcataat
tttatcaagctttatcagcctcgctataacgtattattgcgtgatgataaatcctatcca
tttattttattaaccaaagaacgtcatccaagaatcacgtcttatcgtgggtctaaaaaa
tttgcgggtgaatatttcgggccttatcctcacgcgggagccgtgcgtgaaactttatcg
cttttgcaaaaacttttccctgttcgacaatgtgaaaattccgtttattccaaccgctct
cgtccttgtttgcagtatcaaattgggcgttgttctgcgccttgtgtacagggatatgtt
tccgatgaagaatataatcagcaagttgaattagcgcgtttatttttacaaggcaaagat
caacaggtgttagattatttaatcggtaaaatggagcaggcaagcagaaatttaggtttt
gaacaggctgctcgttatcgcgatcaaattcaggcggtgcgttcggttatagagaaacaa
tttgtatctaatgagcgtttagatgatatggatattatgtctatcgcttaccaacacggg
ttagcctgtgtacaggttatgtttattcgtcaaggaaaagtgctaggcaatcgcagttat
ttcccaaaagtccccgccaatacggatttatcggaacttaccgaaacttttgtggggcaa
ttttatttacaaggtcatcaaggacgaagtatcccgaatagcattattgttgatcgtcaa
ttagctgaaaaatcagagcttgagcaacttcttagcgagcaagcgggcagaaaagtaacg
attcaagaaagcgtaaaaggcgataagagtaaatacttacagctcgcacaagttaatgct
aaagcggctttaaatgtacaatttaaacaatcttcacgaatgtcagcgcgttatcaagcg
ttatgtgatctgttaaatcttcctgaaattaagcgtatggaatgtttcgatataagccac
acgatgggaaatcaaacagtagcatcttgcgttgtctttaatcaagaaggaccactgaaa
tctgattatcgccgttttaatattgaaggcattactggcggggatgattatgcagcgatg
gaacaagccctgcagaaacgttacgaacgtaatttagaagaagataaaattcccgatatt
atttttattgatggtggaaaagggcagttaaatcgtgcgctgaacgtgttccaacatctt
caagtaaaatgggataaaaatagaccgcacttaattggcgtggcaaaaggggttgctcgt
cgagcagggcaggaagtgctgattatcagcaaacaagaccgcgaaattcatttgcccgat
gatagtttggcattgcatttgattcaacatatccgtgatgaaagccataatcacgccata
agcggacaccgtaaaaaacgtcaaaaagcctttacacaaagtggtttagaaaccattgaa
ggcgtgggtgctaaacgtcgtcaggctttactgaaatatcttggtggtttacaaggtgtg
aaaaaggcgaccttagatgaaatagcctctgtaccgggcatttcccctaaacttgctgaa
aggatttttgaaacgcttaaaaacgactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system