KEGG   Haemophilus influenzae F3031 (nontypeable): HIBPF_15080
Entry
HIBPF_15080       CDS       T01395                                 
Name
(GenBank) RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
hif  Haemophilus influenzae F3031 (nontypeable)
Pathway
hif03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HIBPF_15080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hif03021]
    HIBPF_15080
   03400 DNA repair and recombination proteins [BR:hif03400]
    HIBPF_15080
Enzymes [BR:hif01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HIBPF_15080
Transcription machinery [BR:hif03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HIBPF_15080
DNA repair and recombination proteins [BR:hif03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HIBPF_15080
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L DUF6571 BetaGal_dom3
Other DBs
NCBI-ProteinID: CBY81584
Position
complement(1429083..1430069)
AA seq 328 aa
MQGSVTEFLKPRLVDIEQISSTHAKVILEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDVILTLNKSGIGPVVAADITHDGN
VEIVNPDHVICHLTDENASISMRIRVQRGRGYVPASSRTHTQEERPIGRLLVDACYSPVE
RIAYNVEAARVEQRTDLDKLVIELETNGALEPEEAIRRAATILAGQLDAFVDLRDVRQPE
IKEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASIAED
NT seq 987 nt   +upstreamnt  +downstreamnt
atgcagggttctgttacagaatttttaaaaccacgtttagtagatattgaacaaattagt
tcaacacatgctaaagtgatcttagaaccgttagagcgtggttttggtcatactctaggc
aatgcattgcgtcgtatccttctgtcttcaatgccaggttgtgctgtaactgaagtagaa
attgatggcgtattgcatgaatatagtagtaaggaaggtgttcaagaagatattcttgaa
gtacttttgaaccttaaaggtctcgcggttaaagtacagaataaagatgacgttattctg
acattaaataaatctggaattggccctgttgttgcagcggacattacccatgatggtaat
gttgaaattgtaaatccagatcatgtgatttgtcatttaactgatgaaaacgcttcaatt
agtatgcgtatacgtgttcagcgtggtagaggatatgttcctgcttcatctcgtacacat
acacaagaagaacgtccaattggtcgtttgcttgttgatgcttgttatagtccagttgaa
cgaattgcgtataatgtagaggcagctcgtgttgagcagcgtacagatttggataagctc
gttattgagttagaaactaatggtgcacttgagccagaagaagcaattcgtcgagcagca
acaatcttggcggggcaacttgatgcattcgttgatttacgtgatgttcgtcagcctgag
attaaggaagaaaaaccggaatttgatccgattttattacgtcctgtagatgatttagag
ctgacagttcgttctgctaactgtttgaaagcagaaacaattcattatatcggtgattta
gtgcaacgtactgaagtagaattattaaaaacccctaatcttggtaagaaatctcttact
gaaattaaggatgttcttgcttctcgtggcttgtcacttggtatgcgccttgaaaattgg
ccgccagcaagtattgctgaagactag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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