KEGG   Haemophilus influenzae KR494 (serotype f): HifGL_001408
Entry
HifGL_001408      CDS       T02839                                 
Symbol
rnb
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
hik  Haemophilus influenzae KR494 (serotype f)
Brite
KEGG Orthology (KO) [BR:hik00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hik03016]
    HifGL_001408 (rnb)
Enzymes [BR:hik01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     HifGL_001408 (rnb)
Transfer RNA biogenesis [BR:hik03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    HifGL_001408 (rnb)
SSDB
Motif
Pfam: RNB OB_RNB S1 CSD2 DUF2274 TRAM
Other DBs
NCBI-ProteinID: AGV12202
Position
complement(1428555..1430534)
AA seq 659 aa
MFQDNPLLAQLKQQIHDSKEQVEGVVKSTDKAYGFLECDKKNYFIAPPSMKKVMHGDKIK
ATIEKQGDKEQAEPEALIEPMLTRFIAKVRFNKDNKLQVLVDHPSINQPIGAQQAKSVKE
ELQEGDWVVANLKTHPLRDDRFFYATINQFICRADDEFAPWWVTLARHEQSRYPAQGVEH
YEMLDQKTRENLTALHFVTIDSESTMDMDDALYIEPITQNSVQTGWKLVVAIADPTAYIA
LDCQIEQEAKQRCFTNYLPGFNIPMLPRELSDELCSLIANETRPALVCYIETDLAGNITA
KPHFVSAYVQSKAKLVYNNVSDYLDQTQNVWQPETPEIAQQIHWLHQFTKARIQWRKTHS
LLFKEKPDYAFVLAENGKVQEIKAEYRRIANQIVEEAMIIANICAAQFLHEQAKTGIFNT
HSGFDKKYLENAHNFLMANLANEQNQAELAERYSVENLATLNGYCQMRHDIDHLESDYVA
LRLRRYLTFSEFKSELAPHFGLGLEGYATWTSPIRKYSDMVNHRLIKAVLAKQPCEKPQN
EVLARLQEARRQNRLVERDIADWLYCRYLSPKVAENVEFNAEVQDVMRAGLRVQLLENGA
SLFIPAATLHNNKEEIQLNPDELALYIKGDRTYKIGDMVKVKLTEVKETTRSIVGEIVQ
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgtttcaagataatcctctactcgcacaacttaaacaacaaatccacgacagcaaagaa
caggttgagggcgtggtaaaaagcacagataaagcctacggctttttagagtgcgataaa
aaaaactatttcatcgcaccgccatcaatgaaaaaagtgatgcacggcgacaaaatcaaa
gccaccattgaaaaacaaggcgacaaagaacaagccgagccagaagccttaattgagcca
atgctcacacgttttatcgcaaaagtgcggttcaataaagacaacaaattacaagtgctg
gtcgatcacccaagcattaatcagcccattggcgcgcaacaggcgaaatccgttaaagaa
gaactgcaagagggcgattgggtcgtcgcaaatttaaaaacccatccattgcgtgacgat
cgctttttctacgccaccattaatcaatttatttgccgagctgatgacgaatttgcccct
tggtgggtcacattagcacgtcacgaacaatcccgctatcccgcgcaaggcgtagaacat
tatgaaatgttagatcaaaaaacacgtgaaaatctgaccgcacttcattttgtaaccatt
gattccgaaagcacaatggatatggacgacgctttatatatcgaacccatcacacaaaac
agcgtgcaaacaggctggaaactcgtggtcgccattgccgatcccaccgcttacatcgcc
ttagattgccaaattgaacaagaagcgaaacagcgttgcttcacaaattatttaccgggc
tttaacattccaatgttaccccgtgaattatcagatgaattatgctctttaatcgccaat
gaaacccgccccgcactggtttgttatatcgaaaccgatcttgcaggcaacatcacagcc
aaaccgcattttgtttccgcttatgtgcaatctaaagccaaactggtttacaacaacgtc
tcagactacttagaccaaacccaaaacgtgtggcagccagaaacgccagaaattgcacaa
caaattcattggttacatcaatttaccaaagcacgcatacaatggcgtaaaacccattcc
ttactctttaaagaaaagcctgattacgcctttgtgctggcagaaaacggcaaagtgcaa
gaaatcaaagcagaatatcgccgcattgccaatcaaattgtggaagaagcaatgattatc
gccaacatctgtgctgcccaatttttacacgaacaggcaaaaacaggcattttcaacacc
cacagcggttttgataaaaaatacttagaaaatgcgcacaatttcttaatggcaaattta
gccaatgaacaaaatcaagcagaactggcagaacgttattcagtagaaaacttagcaaca
ttaaacggctattgccaaatgcgccacgacatcgaccatctagaaagtgattatgtagcc
ctacgcctacgccgttatttaaccttctccgaatttaaatcagaattagcaccgcacttc
gggctggggctagagggctatgccacttggacatccccaattcgtaaatattctgacatg
gttaatcatcgcttaatcaaagccgtgctggcaaaacagccttgcgaaaaaccacaaaat
gaagttttagcacgtttgcaagaagcacgccgccaaaatcgcctcgtcgaacgtgatatt
gccgattggctatattgccgttatctttcgccgaaagtggctgaaaatgtggaatttaat
gcagaagtgcaagatgtaatgcgggcaggcttacgcgtacaactgctcgaaaatggtgca
tcgctattcattcctgctgccaccttgcacaacaacaaagaagaaatacaactaaaccct
gatgaactcgctctttacataaaaggcgaccgcacttataaaatcggcgacatggtaaaa
gtgaaactcacagaagtgaaagaaaccacacgcagcattgtcggcgaaatcgttcaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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