KEGG   Haemophilus influenzae KR494 (serotype f): HifGL_001422
Entry
HifGL_001422      CDS       T02839                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
hik  Haemophilus influenzae KR494 (serotype f)
Pathway
hik03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hik00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HifGL_001422 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hik03021]
    HifGL_001422 (rpoZ)
   03400 DNA repair and recombination proteins [BR:hik03400]
    HifGL_001422 (rpoZ)
Enzymes [BR:hik01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HifGL_001422 (rpoZ)
Transcription machinery [BR:hik03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HifGL_001422 (rpoZ)
DNA repair and recombination proteins [BR:hik03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HifGL_001422 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6 Phage_T7_Capsid
Other DBs
NCBI-ProteinID: AGV12214
Position
complement(1449293..1449559)
AA seq 88 aa
MARVTVQDAVEKIGNRFDLILTAARRARQLQLNQSAPLVPENNDKPAVIALREIEKGLIN
QDIMDAKEFQEMAKVQETEEAAVALITE
NT seq 267 nt   +upstreamnt  +downstreamnt
atggctcgtgttactgtgcaagatgcagtagaaaaaattggtaaccgttttgatttaatt
ttaacggctgcgcgtcgtgcaagacaattacaacttaaccaaagtgcgccgttagtgcca
gaaaataatgacaaaccagcagttattgcattgcgtgaaatcgaaaaaggtttgattaat
caagatattatggatgcaaaagagttccaagaaatggctaaagtgcaagaaacggaagaa
gcagctgttgcattaattacagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system