KEGG   Haemophilus influenzae KR494 (serotype f): HifGL_001508
Entry
HifGL_001508      CDS       T02839                                 
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
  KO
K02344  DNA polymerase III subunit psi [EC:2.7.7.7]
Organism
hik  Haemophilus influenzae KR494 (serotype f)
Pathway
hik03030  DNA replication
hik03430  Mismatch repair
hik03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hik00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HifGL_001508 (holD)
   03430 Mismatch repair
    HifGL_001508 (holD)
   03440 Homologous recombination
    HifGL_001508 (holD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hik03032]
    HifGL_001508 (holD)
   03400 DNA repair and recombination proteins [BR:hik03400]
    HifGL_001508 (holD)
Enzymes [BR:hik01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HifGL_001508 (holD)
DNA replication proteins [BR:hik03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HifGL_001508 (holD)
DNA repair and recombination proteins [BR:hik03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HifGL_001508 (holD)
SSDB
Motif
Pfam: DNA_III_psi
Other DBs
NCBI-ProteinID: AGV12299
Position
complement(1537091..1537495)
AA seq 134 aa
MNRRDLLLQEMGISQWELYRPEVLQGSVGISVAENIRFITVSDENISSSPLLADVLLSLD
LKKENCLCLNYDQIQHMECKQPIRYWLLSENSDQIDRTLAFCVQAEQVYRSPSWQQFQSN
HQAKRALWQQIQQS
NT seq 405 nt   +upstreamnt  +downstreamnt
atgaacagacgcgatcttcttttacaagaaatgggcatttcccagtgggaattatatcgc
cccgaggtactgcaaggttcagtaggaatcagtgtggcagagaatattcgctttatcact
gtttccgatgagaatatcagtagctcgcctttgttggctgatgtgctgttaagccttgat
cttaaaaaagaaaattgcttatgtttgaattacgatcaaatccagcatatggaatgtaag
cagcctattcgttattggttactatcagaaaatagcgaccaaattgaccgcactttagca
ttttgtgtgcaggcagagcaggtttatcgctcgccaagttggcagcaatttcaatctaat
catcaagccaaacgagcgttatggcaacaaattcagcagtcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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