KEGG   Heterobasidion irregulare: HETIRDRAFT_154087
Entry
HETIRDRAFT_154087 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
hir  Heterobasidion irregulare
Pathway
hir03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HETIRDRAFT_154087
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hir03400]
    HETIRDRAFT_154087
Enzymes [BR:hir01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     HETIRDRAFT_154087
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     HETIRDRAFT_154087
DNA repair and recombination proteins [BR:hir03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     HETIRDRAFT_154087
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH Fpg-like_C
Other DBs
NCBI-GeneID: 20667472
NCBI-ProteinID: XP_009541575
JGI: Hetan2_154087
UniProt: W4KPH0
Position
Unknown
AA seq 326 aa
MPELPEVERAAALVRTLALNKKIEKVLTSEDALIFSGISHQEFAKELVGRTIANVGRYGK
VFYFELDGKGRMPVFHFGMTGTLQVKGEAPTYYKGGLRKVSTEWPPRFMKFILHISSPSS
EVVTEIAYSDARRLGRIRLVTSPFNEPPISTMGFDPILSMPGIDGFKKVVIKRSCPIKSL
LLNQSFSAGIGNWVADEVLYHSRVHPEQRCNTLSEDQLIALHHQIIEVCRIAVEANADDA
KFPQDWLFKHRWSSGELATIKWITVGGRTSAYVAELQHLPNDLTPLPDSDADAVVQTTRR
KRKESASKTLRGSKIRESKRVKTSRQ
NT seq 981 nt   +upstreamnt  +downstreamnt
atgccggaacttccagaagtcgaacgagctgccgctctggttcgcactctcgctctaaac
aagaagatagaaaaggtcctcacgagtgaagatgctttaattttctctggaatttcccac
caggaatttgccaaggaactagtcggaagaacgattgctaatgtcgggcgatatggcaaa
gtgttctacttcgaactcgatggaaaagggagaatgcctgtcttccattttggaatgacc
gggacgctccaggtgaaaggagaagcgcctacgtactataaagggggtctgcgcaaagtg
tcgacagagtggccaccgcgtttcatgaagttcatccttcatatttcgtcaccctcgtca
gaagttgtcactgagattgcctattcagacgcccgccgccttggccgtattcgccttgtc
acatcacccttcaatgaaccgccaatctcaaccatgggcttcgaccccatcctctctatg
cctggaatagatggattcaagaaggtcgtcattaagaggtcgtgtcctatcaaatctttg
cttttaaatcagtccttcagcgctgggattggtaactgggtcgctgatgaagttctatac
cactcccgtgtacatccagaacagcgctgtaataccctatcagaagaccagttaatcgct
ttacatcaccaaattatcgaagtctgccgcatagctgtcgaagccaacgccgacgatgcc
aaatttcctcaagactggttattcaagcaccgttggtcttccggagagttggcaacgatc
aagtggatcaccgtcggtggacgtacttcggcctatgtagcagagctacagcatcttcca
aatgacctcacgccattgcctgactcggatgccgatgccgttgtgcagacgacacggcga
aaacgaaaggagtcagccagcaagactttgagaggttcaaaaatacgtgaatctaagcgt
gtaaagacaagtcgacaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system