KEGG   Heterobasidion irregulare: HETIRDRAFT_56935
Entry
HETIRDRAFT_56935  CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K14655  tRNA pseudouridine32 synthase / 2,5-diamino-6-(5-phospho-D-ribitylamino)-pyrimidin-4(3H)-one deaminase [EC:5.4.99.28]
Organism
hir  Heterobasidion irregulare
Pathway
hir00740  Riboflavin metabolism
hir01100  Metabolic pathways
hir01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:hir00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    HETIRDRAFT_56935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hir03016]
    HETIRDRAFT_56935
Enzymes [BR:hir01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     HETIRDRAFT_56935
Transfer RNA biogenesis [BR:hir03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    HETIRDRAFT_56935
SSDB
Motif
Pfam: PseudoU_synth_2 Ub-RnfH
Other DBs
NCBI-GeneID: 20678379
NCBI-ProteinID: XP_009553051
JGI: Hetan2_56935
UniProt: W4JM89
Position
Unknown
AA seq 491 aa
MAPEDTSSTVSVRPGLKKVTPYWFPYTTMAKARWYDREILEVVSTEFRDRSVEYYRFALD
SGVTTINGKVAKPDTVVRNGDRIENIVHRHEPPVTSTPVRVLYEDLEREFIVIDKPGSIP
VHATGRFFYLSLVEILQREFGYKKVYTVNRLDRLTSGLMVVGLSSQRAHTLSTEFVAGTV
RKEYIARCAGEFPAEEVTVEEPLLTVDRQMGLNIVHPEGKFLLTYPQPAKTIFKRLHYDV
NTDTSVLHCRPLTGRSHQIRVHLQYLGHPIANDPIYSETKIWGAKLGKGGIDVKPSTERS
APVPPPQFQPLQEPEHVSKPSEPVSTVASTKLLPRETGQDIGMGSPVPLSAEAVGIITRL
RNMKDEDEDWSRWRDVVFKTKSRLHPQGMKVKPLPPQNRRKRGGPSWVDENSDKGSPAPS
DTGVYTPASDSATPANDGMLYCPECYLPLHPDPKPERLYIFLHALRYTTSLGTFETGMPE
WAAEGWEWDRS
NT seq 1476 nt   +upstreamnt  +downstreamnt
atggcccctgaggatacatcgtcgacagtatccgttcgaccaggactgaaaaaggttacg
ccatattggtttccatacaccacaatggcgaaggctcgttggtatgatcgagagatctta
gaagttgtgtctaccgaattccgagatcgttctgtggaatactatagattcgcacttgac
tcgggcgttaccacaatcaacggcaaggtcgcaaagccagataccgttgtccgcaatggc
gacagaatagagaatattgtccaccgacacgagccccctgtgacctctacgccagtgaga
gtcctctatgaagaccttgaacgagaattcatcgtaattgacaagcctggaagcatccct
gtccacgcaactggccggttcttctacctctcgctcgtggagatcctacaacgcgagttc
ggttacaaaaaagtttacaccgtgaatcgtctcgatcggctgacctctggcttgatggtc
gtcggcctatcctcgcagagggcacacacactttccaccgaatttgttgccggaacagtg
agaaaagagtacatcgcacgctgtgcaggagagtttccggccgaggaggtaacagtcgaa
gaacctttattgactgtggatcgtcaaatgggtttgaacattgttcaccccgaaggaaag
ttcctcctgacatatccacagcccgccaaaaccatattcaaacgcctacattatgatgtc
aacacagataccagcgttttacactgtcgacctctcactggccgctcgcatcaaattcga
gtccatctacaatatctaggacacccaatcgcgaacgaccccatctattctgagaccaaa
atctggggggcgaaactcggcaaagggggcatcgatgtcaaaccgtctacagaacgctcc
gcgcctgtcccaccgcctcagttccaacctttacaagaaccggaacatgtctcgaagcca
tcagaacccgtgtctactgtagcatcaaccaaattgctaccacgtgaaacaggacaagac
atcggaatgggctcgcctgtcccactatcggcagaggctgtgggcatcatcacgcgcctg
cgaaatatgaaggacgaagacgaagactggtcgcgatggcgcgatgtcgtatttaaaaca
aagagccggctgcatccccagggaatgaaagtaaaacccctacccccacaaaacaggcga
aaacgcggtgggcctagttgggtagacgaaaacagcgataaaggcagtccggccccaagt
gacactggagtgtatactcccgcgtccgattctgccacgcctgcgaacgacgggatgctc
tactgcccggagtgttacttacctctgcatcccgatcccaagccggagaggctatacata
ttcttgcacgcgcttaggtacacgaccagtctgggaacattcgagactggtatgccagag
tgggcggcggagggctgggaatgggatcgatcgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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