KEGG T01720: HIB

Haemophilus influenzae 10810 (serotype b): HIB_15470

Entry

HIB_15470         CDS       T01720

Name

(GenBank) exonuclease I

K01141

exodeoxyribonuclease I [EC:3.1.11.1]

Organism

hiu Haemophilus influenzae 10810 (serotype b)

Pathway

hiu03430

Mismatch repair

Brite

KEGG Orthology (KO) [BR:hiu00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HIB_15470
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hiu03400]
    HIB_15470
Enzymes [BR:hiu01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     HIB_15470
DNA repair and recombination proteins [BR:hiu03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     HIB_15470
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HIB_15470
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HIB_15470

SSDB

Motif

Pfam:

Exonuc_X-T_C RNase_T

Other DBs

NCBI-ProteinID:

CBW29734

Position

1618534..1619955

AA seq 473 aa
MAKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGEPIMFYCKQTNDYLPAPEAV
MVTGITPQECNEKGLSEPEFAANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPY
EYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGIEHENAHDAM
EDVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNALIVCDLTGDIDNLLTKSADELRTDLYTKKSELEERGVSSVPLKLVH
INKCPILAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDN
VETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHYRARHFYKTLTRA
EQIKWKKYRQNKLEKSAVEFESSLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG

NT seq 1422 nt +upstreamnt +downstreamnt
atggcaaaagatttcagcttttttatttacgattatgaaagttttggtgtaaatccagca
acagatcgccctgcacaatttgcgggtattcgtacagatgctgattttaatatcattggc
gaaccaataatgttttattgtaaacaaaccaacgattatttaccggctcctgaagccgta
atggtcacaggaattacgccgcaagaatgtaatgaaaaggggctttcagagcctgaattc
gccgcaaatatcttagcagaattttcccaacccaatacttgtgtcatgggttataacaat
attcgctatgatgatgaaatgacacgttatacgttttatcgtaatttcattgatccttat
gaatacagctggaaaaacggaaattcacgctgggatttgttagatttagtacgagcctgt
tatgccttgcgtccagaagggattaattgggcttatgacgatgatggaatgccaagtttc
cgcttagaaaaactcactaaagcaaatggtattgagcatgaaaatgctcacgatgccatg
gaggatgtatatgcaactattgctatggcgaaattaattaaagaaaaacagcctaaatta
ttccaatatttctttgaaaatcgcggtaaaaaagaaatcgaaaaattagttgatacaggc
gcaatgacacctttagtgcatgtttctggaatgctagggaattatcgtggaaattgcact
tgggttgcacctttagcttggcatccgacaaatcaaaacgcactcattgtttgtgattta
actggcgatatcgataatttattaaccaaaagtgcggatgaattacggacagatttatat
accaaaaaatctgaattagaagaaagaggagtttcatctgttccgttaaagcttgtgcat
atcaataaatgtcctattttagcaccagctaaaactttgttaccagaaacagcaaatcga
ttgggtattgatcgacaattatgcttggataatcttgcaaaattacgagcatcttttgat
attcgtgaaaaagtggcggatatttttaatgaagaacgtcaatttgcatcaaatgataat
gtagaaactgagttatacaatggcttttttagcaatgctgataaaaataatatggctatt
ttacgtagtttacctgcagaaaaattatctgaacatggtttagcttttgaagataaacgt
atccttgaattattgttccattatcgcgctcgtcatttttataaaaccctcacacgcgct
gaacaaattaaatggaaaaaataccgacagaataaacttgaaaaaagtgcggtagagttt
gaatcaagtttacaacgtttagctgaggaacattcagataattctgaaaaactatctttg
ctacaacaagtatatgaatatggtataaaattactaggttag

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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