KEGG   Haemophilus influenzae 477: NTHI477_00524
Entry
NTHI477_00524     CDS       T03720                                 
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hiw  Haemophilus influenzae 477
Pathway
hiw03410  Base excision repair
hiw03430  Mismatch repair
hiw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hiw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NTHI477_00524 (recJ)
   03430 Mismatch repair
    NTHI477_00524 (recJ)
   03440 Homologous recombination
    NTHI477_00524 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hiw03400]
    NTHI477_00524 (recJ)
DNA repair and recombination proteins [BR:hiw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     NTHI477_00524 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     NTHI477_00524 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      NTHI477_00524 (recJ)
SSDB
Motif
Pfam: DHHA1 RecJ_OB DHH Adhesin_P1_C
Other DBs
NCBI-ProteinID: AJO87561
Position
complement(537217..538944)
AA seq 575 aa
MKKLIQRREIPIGNSVSNHPLLDRLYRARRIQNTEELDRTLKSMLNPNQLYGIEQAVNLL
VEAYQQQQKIVIVGDFDADGATSTALSVLALRQLGFSDVDYLVPNRFEQGYGLSIPVAEM
AIEKGVQLLMTVDNGVSSFDGVAFLKEKGIRVLVTDHHLPPETLPPADAIVNPNLSQCGF
PSKSLAGVGVAFYLMLAVRAKFRELGIFTAETQPNFTDLLDLVALGTIADVVPLDQNNRI
LAYQGLMRIRARRCRPGIIALAEVANRNVEQFTSSDLGFCIGPRLNAAGRLDNMSIGVEL
LLANEMSKARELALDLDQLNQTRKEIEAGMKLEAIKICQNLTALFKELPYGITLYQPDWH
QGVLGIVSSRIKDQYHRPVIAFAQDSEGILKGSARSIEGLHMRDVLERIHSQHPNMILKF
GGHAMAAGLSIREEHFADFQHIFNQTVADWLDEEHLQGVIWTDGELNSNEFNLETAELIK
SVGTWGQGFPEPCFDGEFKILDQRAIGQNKNHLKMLLEPKQGGVLLDAIAFNINTRLYPD
LSIKQARLAYKLDINEFRGNRSLQLLVDYIEPIDE
NT seq 1728 nt   +upstreamnt  +downstreamnt
gtgaaaaaacttatccaacgccgtgaaattccaattggaaattctgtttcaaaccatccc
ttattagatcgcctttatcgcgctcgtcgtattcaaaacaccgaagaattagaccgcact
ttgaaatcaatgctcaatccaaatcaattatatggcattgagcaagctgtaaatttatta
gtggaagcctatcaacaacagcaaaaaattgtgattgttggggattttgatgctgatggt
gcaaccagcacagcattgagtgtgctggctttaagacaacttggcttttctgatgtggat
taccttgtaccaaatcgatttgaacagggttatggtttgagtattcccgtggctgaaatg
gcaattgaaaagggcgttcagcttttaatgacggtggataacggcgtttcatcttttgac
ggtgtggcatttttgaaagaaaaaggcattcgagttttagtcacggatcatcatttaccg
cccgaaactttgccgccagccgatgcgattgttaatcctaatttaagtcagtgtggtttt
ccttcaaaatccttagcgggcgttggtgtggcgttttatttgatgttagccgtacgagca
aaatttcgtgaactcggtatttttacggcagaaacacaacctaattttactgatttgctc
gatctggtggcactaggcactatagctgatgttgttccgttagatcaaaataatcgtatc
cttgcttatcaaggtttaatgcggattcgtgcacggcgttgtcgtcctggtattattgcg
ttggctgaagtggctaaccgtaatgttgaacagtttacttcaagtgatctcggtttttgt
attgggccgcgtttaaatgcagcagggcgtttagataatatgtcgattggggtagagctt
ttgctggcgaacgaaatgtcaaaagccagagaattagctttagatcttgaccaactcaat
caaacgcgtaaagaaattgaagcaggtatgaagcttgaggcaataaaaatttgtcaaaat
cttaccgcactttttaaagagttaccctatggtattacgctttatcaacctgattggcat
caaggcgtattaggcattgtgtcatcaaggattaaggatcaatatcatcgtccagtgatt
gcctttgcacaagatagtgagggaattttgaaaggttccgcgcgttctattgaaggttta
catatgcgtgatgttctggagcgtattcattcgcaacatcctaatatgattttaaaattt
ggcggacacgcaatggcggcaggcttgagtattcgcgaagaacattttgccgatttccaa
catatttttaatcaaaccgttgccgattggcttgatgaagaacatctacaaggcgtaatt
tggacagatggcgaactaaattcaaatgaatttaatcttgaaacggcagagctgataaaa
tcggtaggcacttgggggcaagggtttcctgagccttgctttgatggcgaatttaaaatt
ttagaccagcgcgcaattgggcaaaataaaaatcatctaaaaatgttgctagaaccgaaa
caaggcggggttttattagatgcgattgcgtttaatattaatacaagattgtatcctgat
ctttcaattaaacaggctcgtttagcctataaattagatattaacgaatttcgtggcaat
cgtagcctacaattattggtagattatattgagccgatagatgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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