KEGG T01981: R2866

Haemophilus influenzae R2866 (nontypeable): R2866_0912

Entry

R2866_0912        CDS       T01981

Symbol

recB

Name

(GenBank) Exodeoxyribonuclease V, beta subunit

K03582

exodeoxyribonuclease V beta subunit [EC:3.1.11.5]

Organism

hiz Haemophilus influenzae R2866 (nontypeable)

Pathway

hiz03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:hiz00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    R2866_0912 (recB)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hiz03400]
    R2866_0912 (recB)
Enzymes [BR:hiz01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     R2866_0912 (recB)
DNA repair and recombination proteins [BR:hiz03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     R2866_0912 (recB)

SSDB

Motif

Pfam:

UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_30 AAA_12 ResIII AAA_11 AAA_25

Other DBs

NCBI-ProteinID:

ADO80860

Position

932184..935819

AA seq 1211 aa
MAETIPLNPITLPLNQISLIEASAGTGKTYTIGSLYLRLLLKAGENNFSRPLNVEEILVV
TFTEMATEELKKKIRERITDAIDKLTAFAKTQDKSAFKNDEFLTALCDNLDIFEAIHRLK
LAEQNMDLAAIYTIHGFCRRMLMQYAFHSGIHFNLELIKDQSDLLVRFANEFWREHFYPL
DFESANFIATELVSPANVLSLLKADLGKDLQVEIENKQALSVPIQIFLPQYLGGYQKALN
ELKAFWLESADEILAIITNELEKDYPKDQLKSLNRKKYQVKRLGDWINKINQWSNNPRDY
QINTTLKDYFLQSSIEKNCEESTDKNKDKKPAMPFYSPIFAELEKRVNALMTPDLLSKLT
LYHYRQGLQQKLLDYKLNHQEKSFDDLLRLLCEALQDAQGDELAEMIRFQYPFAMIDEFQ
DTDSQQYAIFSKIYRDNPEKNTGFIMIGDPKQAIYRFRGADIFTYLKASDEAQSRFELTK
NYRSEKHLVDGVNALFDFPQSPFIYQNINFTAVDSRDDHLRFYLNGKVEPAYRFYLTESD
KVNKTEMAKICAISIQHWLKSAAENQAVFQNEDTYKTLQAANIAVLVRDKNEAALVKNEL
QKLGIASVYLSDQNSVFDSNVAKELAWVLKACLNVAERPILNAIATALFGLNAADIHQIQ
QNEADWQRWADSFAQYQQTWQRQGILAMLHQILLEQGISERLLSQATGERDLTDFLHLAE
ILQQAATLHESEAALLSWFEKQIQGEGRQEAQIRLESERQLVKIVTIHKSKGLEYDLVWL
PFLAAPSKDPSKKYINIYYSKERDETLWDIENRNLNALCEETFAEELRLLYVALTRAKYQ
MAFALPAQFDKKWNALHYVLSQGEIGKEINLSDSKDTETLLQTFKEKMQDNVEICTKPNL
EALPTLSINTKNDDFKASEFTGNIEQDWRITSFTSIEQAHRRQNYFTESAGKKHAVFDDA
KDYDSQNAIEISTALLNENESNILDLPRGKQVGTALHRHFENCYFSDLANTEEIDKLRQS
LQLDETFTESLQNWLQQISHTPLSNEIGIALADLANKDCIKEMPFYLAIREHFDVEAFNH
TLKAHHHLPSESLQFEQIQGMVRGSIDLVFRHNGKYYLVDYKSNFLGSTLADYNQEALKK
EMLHSHYDWQYLIYTLALHRYLQSVVPHYDYARDFGGVFYLFLRGMNGEPQSGVFYDRPS
VELITELDGVF

NT seq 3636 nt +upstreamnt +downstreamnt
atggccgaaacaatcccactgaatcccatcacgttgcctttaaatcaaattagcttaatc
gaagcgtccgctggtacagggaaaacctacactattggttctttatacctccgactttta
ttaaaggcgggagaaaataacttttctcgtccgttaaatgtggaagaaattctggtggta
acctttacggaaatggcaacagaagaactcaagaaaaaaattcgtgagcgtataacagat
gcgattgataaactcactgcctttgctaaaacccaagataaatccgcatttaaaaatgat
gaatttcttaccgcactttgtgataatttagatatttttgaggcaattcatcgcttaaag
ttagctgaacaaaatatggatctggcggcgatttataccattcacggtttttgtcgccgt
atgttgatgcaatatgctttccattcaggcattcacttcaatttagaattaataaaagat
caatctgatttgttagttcgttttgctaatgaattttggcgagagcatttttatccgttg
gattttgaatctgcgaattttatcgcgacagaattagtatcgcctgcaaatgtgttgtct
ttgttaaaagcggatttaggtaaagatttgcaggtggagattgaaaataaacaggcgtta
tctgtaccaatacaaatctttttaccgcaatatcttggtggttatcaaaaggcgttgaat
gaattaaaggcattttggttagaaagtgcggatgaaattttagcgattattaccaatgaa
ctggagaaagattatccaaaagatcagttgaaatcgttaaatcgtaaaaagtaccaagta
aagcgtttaggggattggattaataaaatcaatcaatggtcaaataatcctagagattat
caaattaataccacattgaaagactatttcctacaatcatctattgagaaaaattgcgaa
gaatcaacggataaaaataaagataaaaaacccgcaatgcctttttattccccgattttt
gcagagcttgaaaagcgcgttaatgccttaatgacaccagatttactaagcaaactcact
ctttatcattatcgacaaggcttacaacaaaaacttttagactataaactaaatcatcaa
gaaaaatcctttgatgatttattgcgtttgctttgtgaagccctgcaagatgcgcaaggg
gatgaattagcggaaatgattcgtttccaatatccttttgcgatgattgatgaatttcag
gatacggattcacaacaatacgctattttttcaaaaatttatcgtgataatcccgaaaaa
aatactggttttattatgattggcgatccgaagcaggcgatttatcgtttccgtggtgca
gatatttttacttatctaaaagcatcggatgaagctcaatctcgctttgaactcactaaa
aattatcgttcagagaagcatttggttgatggcgtaaatgctttattcgattttcctcaa
tcgccatttatttatcaaaatattaactttactgctgttgattctcgtgatgatcatctt
cgattttatttaaatggtaaagttgaaccagcttatcgtttttatctaactgaaagtgac
aaagtgaataaaactgaaatggcaaaaatatgtgctatttctattcaacattggctaaaa
agtgcggcagaaaatcaggcagtttttcaaaatgaagatacctataaaaccttacaagcg
gcgaatattgccgtattggtgcgtgataaaaatgaagcggctttagtaaaaaatgaattg
caaaaattggggatcgcgtcggtttatctttctgatcaaaatagcgtatttgatagcaat
gttgcgaaagaattagcttgggtacttaaagcctgtttgaatgtggctgaacgcccaatt
ttgaacgcaattgcgaccgcactttttggcttaaatgcagcggatattcatcaaattcag
caaaatgaggcagactggcaacgttgggctgatagctttgctcaataccaacaaacttgg
caacgccaaggaatattggcaatgttacatcaaattttattggagcaaggcatttcagaa
cgcttattaagccaagccacgggcgagcgagatttaacggatttcctacatttggcagaa
attttacaacaagctgccacgctacacgaaagtgaagcggcattgctcagttggtttgaa
aaacaaattcaaggcgaaggtcgtcaagaggctcaaattcgtttagaaagtgaacgtcag
ttagtgaaaattgtgacaatccataaatctaaaggcttagaatatgatttagtttggcta
ccatttttagctgcgccgagcaaagatccaagtaaaaaatacatcaatatttattattct
aaagaacgagatgaaaccttatgggatatagaaaatcgcaatttaaacgctctttgtgaa
gaaacttttgcggaagagttacgtttactttatgtggctttaacgcgtgccaaatatcaa
atggcattcgctttgcctgcgcaatttgataaaaaatggaatgccttgcattatgtacta
agccaaggtgaaataggcaaggaaataaatttgtcggattctaaagataccgaaacattg
ttgcaaacctttaaagaaaaaatgcaagataatgtggaaatctgtactaagccaaatcta
gaggctttgccgaccttatcaattaatacaaaaaatgatgattttaaagcctcagaattt
acgggcaatattgagcaagattggcgaataaccagttttacttcaattgaacaagcacat
cgccgacaaaattatttcactgaaagtgcgggtaaaaaacacgctgtttttgatgacgca
aaagattacgatagtcaaaatgctattgaaatttccaccgcacttttaaacgaaaatgaa
tcaaatattttagatttaccacgaggtaaacaagtcgggactgcattgcatcgccatttt
gaaaattgctatttttctgacttggcaaatacagaagaaattgacaaattaagacaatcc
ttacagttagatgaaacttttacagagtcgctacaaaattggctacaacagatttcacat
acaccactttctaatgaaataggaatagcattagctgatttagcaaataaagattgcatt
aaagaaatgccattttatctggctattcgggaacattttgatgttgaagcgtttaatcac
acgttgaaagcgcatcatcatttgccaagcgagtcacttcaatttgaacaaattcagggc
atggtgcgaggttcgattgacttagttttccgccataatggaaaatattatcttgttgat
tataaatctaatttcttaggttcaacccttgctgattacaatcaagaggcattgaaaaaa
gaaatgttacacagtcactatgattggcaatatttaatttatacgctggcattacatcgt
tatttacaaagtgttgtgcctcattacgattatgcacgagatttcggcggggtattttat
cttttcttacgtggaatgaacggtgagccacaatctggcgtattttacgatcgtccaagc
gttgaattaatcacagaattagacggggtgttttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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