KEGG T04687: BST95

Halioglobus japonicus: BST95_02955

Entry

BST95_02955       CDS       T04687

Name

(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

hja Halioglobus japonicus

Brite

KEGG Orthology (KO) [BR:hja00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hja03032]
    BST95_02955
   03400 DNA repair and recombination proteins [BR:hja03400]
    BST95_02955
Enzymes [BR:hja01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BST95_02955
DNA replication proteins [BR:hja03032]
Prokaryotic type
  DNA Topoisomerases
   BST95_02955
DNA repair and recombination proteins [BR:hja03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BST95_02955

SSDB

Motif

Pfam:

DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 Vint

Other DBs

NCBI-ProteinID:

AQA17341

Position

complement(614999..617413)

AA seq 804 aa
MSEEQNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEIVDNSIDEALAGHCSK
IEIVIHPDESVTVSDDGRGIPTEMHDEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGVG
VSVVNALSSKLTLTIRREGKLYEQVYRHGVPDEPLAVIGDTDTSGTAIRFHPSSETFTNI
EFHFDQLAKRLRELAFLNSGVCIVLKDERSGNEETYNYEGGLNAFVDYLNQNKTPINKAF
YFQVDMDEGIGVEVALQWNDSFQESILCYTNNIPQRDGGTHLAGFRAALTRNLNAYIEKE
GLAKKATVSTTGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVKTAVEQAMNARFAEY
LLENPQEAKAVVGKMLDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL
YLVEGDSAGGSAKQGRNRKYQAILPLKGKILNVEKARFDKMLGSAEVGTIVTALGCGIGK
EEFDPDKLRYHSIIIMTDADVDGSHIRTLLLTFFFRQMRELIERGHVYIAQPPLYKIARG
KQHQYLKDDEALNQYLTQSALESASIFVNPDAPAISGEGLQALVDQYRDVAATIDRLSRL
YAPDVLWQTVYGDSLTQEEMREEAKVTAFAETLSERLLTVAPKGSSYSVVVRKDTERSLF
FPVVKLLAHGVESETEYHHEFFGSGEYRSMVELGNTLNNLIEEEGYFQRGEKVFNTQSFA
EGLDWLMNEARRGYSIQRYKGLGEMNPEQLWETTMDPEVRRMLQVSIEDAIAADQIFTTL
MGDQVEPRRDFIEENALSVANLDV

NT seq 2415 nt +upstreamnt +downstreamnt
atgagcgaagaacaaaattacgattcctccagtattaaggtactgaaaggccttgatgcg
gtgcgcaagcgccccggaatgtacatcggtgatactgatgacggtaccggcctgcaccac
atggtgtttgagatcgtggataactccattgatgaggcccttgctggccactgcagcaag
attgaaatcgttattcacccggatgaatcggtgaccgttagcgatgatggacgcggtatt
cccaccgagatgcacgatgaaggcgtctctgcggcggaagttatcatgaccgtactgcat
gccgggggtaagttcgacgacaatacctataaggtatccggtggtctgcacggtgttggt
gtgtctgtggttaacgccctctcctccaaattgaccctgacaattcgtcgcgaaggcaag
ctctacgagcaggtataccgccatggtgtgcccgatgagcctctggccgtgattggcgac
accgatacatccggtaccgccattcgtttccacccctcttctgagacgttcaccaacatc
gagttccactttgaccagctcgccaagcgtttgcgggaactggctttcctgaactccggt
gtttgcattgtgctgaaagacgagcgcagtggtaatgaagaaacatataactacgaaggc
ggcctgaacgcctttgtcgattacctgaatcagaacaaaacccccatcaacaaggccttt
tacttccaggtcgatatggatgaaggcattggtgttgaggtggcgttgcagtggaacgat
tcgttccaggaaagcattctctgctacaccaacaatattccccagcgtgatggcggtacc
catttggcgggcttccgtgcagcactgacccgaaacctcaatgcttatatcgagaaagaa
ggcctggccaaaaaagccacggtatccacaaccggtgacgatgcccgggaaggcctgacc
gctgtgatctcggtgaaagttccggatcccaagttttccagccagactaaggacaaactg
gtttcttccgaggttaaaacggcggttgagcaggcgatgaacgcccgctttgccgagtat
ctgctggaaaacccccaggaagctaaagcggttgtcggtaagatgctggatgcggcccgt
gcccgtgaagcggcgcgtaaagcgcgcgagatgacccggcgtaagggtgcgctggatatt
gcggggctgccgggcaagctggctgactgtcaggagaaggaccctgccctgtcggaactc
tacctggtagagggtgactcggcgggtggttcagccaaacagggccggaaccgtaagtac
caggcgattctgcccttgaaaggtaagattctgaacgtcgagaaggcccgttttgacaag
atgctgggctcggcagaagttggcacgattgtcaccgctctgggttgcggtattggcaag
gaagaatttgatcctgacaagctgcgttaccacagtatcatcatcatgaccgacgctgat
gttgacggatctcacatccgtacgctgctcctgaccttcttcttccgtcagatgcgtgaa
ttgattgagcgcggccacgtgtatattgcccagccaccgctgtacaaaatcgctcgtggc
aagcagcaccagtatctcaaggacgacgaagcacttaatcagtacctgacccagtcagcc
ctggagagcgcatcgatctttgttaatcccgatgccccggccatttccggtgaaggcctg
caggcgctggtagaccaataccgtgacgtcgctgcgaccattgatcgtttgagccgtctg
tatgccccggatgttctgtggcaaacggtttacggtgattctctcacccaggaagagatg
cgcgaagaagccaaggtcactgctttcgcagagactttgagtgagcgcttactcaccgtt
gcacccaagggtagcagctactctgtagtagtgcgcaaggacaccgagcgcagcctgttc
ttccccgttgtgaagctgttggctcacggcgtggaatctgaaaccgagtatcaccacgag
ttttttggttccggcgagtatcgcagcatggtggaactgggtaacaccctgaataacttg
atcgaagaagagggttacttccagcgcggtgaaaaagtgtttaacacccagagctttgcc
gaaggcctggactggctgatgaacgaggcgcgtcgcggctacagcattcagcgctataag
ggcctgggtgagatgaacccggagcagctgtgggaaaccacaatggatccagaggtgcgc
cggatgctgcaggtgtccattgaggacgcgattgccgccgaccagatcttcaccacccta
atgggtgatcaggtagagccgcgacgcgatttcatcgaagagaatgccctgtcggtagct
aacctggacgtataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (150)   
   KEGG ORTHOLOGY (1)   
   RefGene (147)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (164)   

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