KEGG   Halalkalicoccus jeotgali: HacjB3_01395
Entry
HacjB3_01395      CDS       T01271                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
hje  Halalkalicoccus jeotgali
Brite
KEGG Orthology (KO) [BR:hje00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hje03016]
    HacjB3_01395
Enzymes [BR:hje01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     HacjB3_01395
Transfer RNA biogenesis [BR:hje03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    HacjB3_01395
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: ADJ13672
UniProt: D8J591
Position
276614..277177
AA seq 187 aa
MRLFVSIDLPGRFAERIAALQEELSTAEGIRPTDPTQTHVTMKFLGEVDEDRIPELGAAL
EKAIAEADVSPFEAEYGGLGVFPSLEYISVVWLGVREGSEEMGRLHEAVERETTALGFDP
AEHDFTPHATLARMDHAGGKELVQRLVRERDPTVGRTTVRALRLTESELGPDGPAYSTLR
SYPLDSE
NT seq 564 nt   +upstreamnt  +downstreamnt
atgcgcctgttcgtcagcatcgaccttcccgggaggttcgccgagcgaatcgcggccctt
caagaggaactctcgacggcggaggggatccgccccaccgaccccactcagacccacgtc
acgatgaagttcctcggcgaggtcgacgaggaccgcatccccgaactcggggcggccctc
gaaaaggctatcgccgaggccgacgtctcgcccttcgaggccgaatacggcgggctcgga
gtctttccctccctcgagtacatcagcgtcgtctggctcggggtccgcgaggggagcgag
gaaatgggccggctccacgaggccgtcgaacgcgagacgacggcgctggggttcgatccg
gcggagcacgacttcaccccccacgcgaccctcgcgcgaatggatcacgcgggcgggaag
gaactggttcagcgactcgtccgcgagcgcgacccgacagttggccgaacgacggttcga
gcgcttcgactgaccgagagcgaactcggccctgacgggcccgcctactcgacgctccgt
tcgtatccgctcgactcggagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system