KEGG T01271: HacjB3

Halalkalicoccus jeotgali: HacjB3_07335

Entry

HacjB3_07335      CDS       T01271

Name

(GenBank) hypothetical protein

K14415

tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]

Organism

hje Halalkalicoccus jeotgali

Brite

KEGG Orthology (KO) [BR:hje00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hje03016]
    HacjB3_07335
Enzymes [BR:hje01000]
6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     HacjB3_07335
Transfer RNA biogenesis [BR:hje03016]
Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    HacjB3_07335
Prokaryotic type
   tRNA splicing ligases
    HacjB3_07335

SSDB

Motif

Pfam:

RtcB

Other DBs

NCBI-ProteinID:

ADJ14852

UniProt:

D8J295

Position

complement(1367903..1369363)

AA seq 486 aa
MTTFDADGITLEKVREYVWEIPREDGMRVPARVLASEALLEQISDDKTLQQLKNTAHLPG
ISEHALCMPDGHQGYGFPVGGVAGLDAEEGCISPGGVGYDINCGVRMVRTNLTYDDVAGR
EEELVDALFANVPSGLGGGGVVESGIDTVEAILDRGMEWALEEGYAVPADLDHCEDEGVR
EDSDPAAVSQKAKDRGKNQIGSLGSGNHFLEVQRVTDVFREDVAEAYGLAEDRIVVLIHC
GSRGLGHQVCTDYLRKIEKRHGDLLAELPDKELAAAPAGSELAEEYYGAMCAAINFAWVN
RQLITHRTRAVFERVFGRDHEEMGMELLYDVAHNIAKKEVHEVDGEERELYVHRKGATRA
FPAGHPEVPAAYREVGQPVIIPGSMGAGSYVLRGGSESMAETFGSTAHGAGRVMSRTQAK
NEFWGEDVRDDLQDQDRIYVKAQSGATVAEEAPGVYKDVDEVVRVSDALGIGDRVARTFP
VCNIKG

NT seq 1461 nt +upstreamnt +downstreamnt
atgaccacgttcgacgccgacgggatcacgctcgagaaggtgcgtgagtacgtctgggag
atcccccgagaggacgggatgcgcgtgcccgcccgcgtcctcgcgagcgaggcgctctta
gagcagatcagcgacgacaagaccctccagcagctgaaaaacaccgcccacctgccgggg
atcagcgagcacgcgctgtgtatgcccgacggccatcagggatacgggtttccggtcggc
ggcgtcgccgggctcgacgccgaggagggctgtatctcgccgggcggcgtgggatacgac
atcaactgcggcgtgcggatggtgcggacgaacctcacctacgatgacgtggcgggccgc
gaggaggaactcgtcgacgccctctttgcgaacgttccctcggggttaggcgggggcggc
gtcgtggaaagcgggatcgacaccgtcgaggcgatcctcgaccggggcatggagtgggcc
ctcgaagaggggtatgccgtgcccgctgatctcgatcactgcgaggacgagggcgtacga
gaggacagcgatccggcagcggtgagccagaaagcaaaggacagagggaagaaccagatc
ggctcgctcggctcgggaaaccacttcctcgaggtccagcgcgtcaccgacgtgttccgc
gaggacgtcgccgaggcctacggactagctgaggaccggatcgtcgtcctgatccactgt
gggtcgcggggactcggccaccaagtctgtacggactacctccggaagatcgagaaacgc
cacggcgacctgctcgcggagctccccgataaggagcttgcggccgcgcccgccggttcc
gaactggccgaggagtactacggcgcgatgtgtgcggcgatcaacttcgcgtgggtaaac
cgccagctgatcacccacagaacgagggcggtcttcgagcgggtgttcggacgggaccac
gaggagatgggcatggaactgctctacgacgtcgcccacaacatcgcgaaaaaggaggtc
cacgaggtggacggcgaggagcgcgaactgtacgtccaccgcaagggcgcgacccgggcg
ttcccggcgggccaccccgaggtgcccgccgcctaccgcgaggtcggccagccggtcatc
atccccgggagcatgggcgcgggcagctacgtgctgcgggggggcagcgagtcgatggcg
gaaacgttcggctcgacggcccacggcgcgggccgggtgatgagccggacgcaggcgaaa
aacgagttctggggcgaggacgtacgcgacgacctgcaggaccaggaccgcatctacgtc
aaagcccagagcggcgcgaccgtcgccgaggaggccccgggcgtttacaaggacgtcgac
gaggtggttcgcgtttcggacgcactggggatcggcgaccgggtcgcgcgcacgtttccg
gtctgtaacatcaagggttag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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