KEGG   Haematospirillum jordaniae: AY555_00845
Entry
AY555_00845       CDS       T04366                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
hjo  Haematospirillum jordaniae
Pathway
hjo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hjo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AY555_00845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hjo03021]
    AY555_00845
   03400 DNA repair and recombination proteins [BR:hjo03400]
    AY555_00845
Enzymes [BR:hjo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AY555_00845
Transcription machinery [BR:hjo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AY555_00845
DNA repair and recombination proteins [BR:hjo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AY555_00845
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD IDH
Other DBs
NCBI-ProteinID: AMW33960
UniProt: A0A143DBQ6
Position
complement(173552..174568)
AA seq 338 aa
MIQKNWQELIKPQKLNVEPGDDPACTATVVAEPLERGFGMTLGNALRRVLMSSLQGAAVT
AIQIEGVLHEFSSVPGVREDVTDIILNIKALALRMQGEGSKRMTLKATGPCVVTAGNIET
GHGVEVLNPDLVICHLDTNASFNMELTVDTGKGYVPAANNRSEDSPIGLIPVDSIFAPVR
RVSYRVENARVGQVTDYDKLVMNVETNGAVTPEDAVALAARILQDQLALFINFDEPQAAS
EAYKEDDLPFNRNLLRKVDELELSVRSFNCLKNDNICYIGDLVQKTEAEMLRTPNFGRKS
LNEIKHLLAHMSLHLGMEVPNWPPENIEELAKKLEDPY
NT seq 1017 nt   +upstreamnt  +downstreamnt
gtgatccagaaaaactggcaggaactaatcaaaccgcaaaaactcaacgtcgagcccggt
gacgatcccgcgtgcacggcaaccgttgttgcagaaccgcttgagcgcggctttggcatg
accttgggcaatgccctgcgtcgtgttttgatgtcttccctccagggtgcggctgttacc
gcgatccagattgaaggcgtcctccacgagttttcctctgtccccggtgtcagggaagat
gtcacggatatcatcctgaatatcaaggctcttgccttgagaatgcagggtgaaggttcc
aagcgcatgacccttaaggcaacaggtccgtgtgttgtgacagccggaaatattgagact
ggtcacggcgtagaggtgctgaatcccgatttggtgatttgtcatcttgataccaatgcc
tcctttaacatggagttgaccgttgataccggcaagggttacgtgccggctgcaaataat
cgttccgaggattcacctattggcctgatcccggttgattcgatttttgctccggttcgt
cgtgtgtcctatcgcgttgagaatgcgcgtgttggtcaggtgacggactatgacaagttg
gtcatgaacgtagagaccaatggtgctgtgacgccggaagatgctgttgctttggcagcc
cgtattcttcaggatcagcttgctctcttcatcaattttgacgagccgcaggctgcttcc
gaggcgtataaagaagatgatctgccattcaatcgcaatcttctgaggaaggttgacgag
ttggagttgagtgttcgttcgttcaattgcctgaagaacgacaatatttgttacattggt
gatctggttcagaagaccgaggcagagatgcttcgtacgccgaactttggtcgtaagtcc
ttgaatgagatcaagcacctgcttgcgcacatgtccctgcaccttggcatggaagtgccg
aactggccgcctgagaatattgaagaacttgccaagaagcttgaagatccctattga

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