KEGG   Haematospirillum jordaniae: AY555_08305
Entry
AY555_08305       CDS       T04366                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
hjo  Haematospirillum jordaniae
Pathway
hjo02024  Quorum sensing
hjo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hjo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AY555_08305
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AY555_08305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hjo03019]
    AY555_08305
   03036 Chromosome and associated proteins [BR:hjo03036]
    AY555_08305
Messenger RNA biogenesis [BR:hjo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AY555_08305
Chromosome and associated proteins [BR:hjo03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    AY555_08305
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AMW35175
UniProt: A0A143DEL3
Position
1760368..1760619
AA seq 83 aa
MPSEKSQNIQDVFLNHIRKAKIPVTVYLVNGVKLQGIVSCFDNFCLLLRRDGHTQLIYKH
AVSTVMPGGPVQLFEPKPEDEQE
NT seq 252 nt   +upstreamnt  +downstreamnt
atgcccagcgaaaaatcccagaatatacaggatgttttcctgaaccatatccgcaaggca
aaaattccagtcactgtctaccttgttaatggggttaagttgcaaggtattgtaagctgc
tttgataatttctgccttctgctccgtcgggatggtcatacccagctgatatataagcat
gctgtttccaccgtgatgccgggtggtccggtgcagctttttgaacccaagcctgaagat
gaacaagagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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