KEGG   Halobiforma lacisalsi: CHINAEXTREME04570
Entry
CHINAEXTREME04570 CDS       T04669                                 
Name
(GenBank) translation elongation factor EF-1 subunit alpha
  KO
K03231  elongation factor 1-alpha
Organism
hlc  Halobiforma lacisalsi
Brite
KEGG Orthology (KO) [BR:hlc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hlc03019]
    CHINAEXTREME04570
   03016 Transfer RNA biogenesis [BR:hlc03016]
    CHINAEXTREME04570
   03012 Translation factors [BR:hlc03012]
    CHINAEXTREME04570
   04131 Membrane trafficking [BR:hlc04131]
    CHINAEXTREME04570
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hlc04147]
    CHINAEXTREME04570
Messenger RNA biogenesis [BR:hlc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     CHINAEXTREME04570
Transfer RNA biogenesis [BR:hlc03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    CHINAEXTREME04570
Translation factors [BR:hlc03012]
 Eukaryotic type
  Elongation factors
   CHINAEXTREME04570
Membrane trafficking [BR:hlc04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    CHINAEXTREME04570
Exosome [BR:hlc04147]
 Exosomal proteins
  Proteins found in most exosomes
   CHINAEXTREME04570
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 RsgA_GTPase Septin FeoB_N GTP_EFTU_D4 Ras ATP_bind_1
Other DBs
NCBI-ProteinID: APW97086
UniProt: M0LPM1
Position
complement(969801..971069)
AA seq 422 aa
MTQEKPHQNLAIIGHVDHGKSTLVGRLMFETGSVPEHVIEQHREEAEEKGKGGFEFAYVM
DNLAEERERGLTIDIAHQEFETDEYDFTIVDTPGHRDFVKNMITGASQADHAVLVVAADD
GVAPQTQEHVFLARTLGIDELVVAVNKMDVVEYEETRFREVVAEVKDLLDQVRFATEDAS
FIPISAFEGDNVAELSDQMPWYDGRALLETLNDLPVPEPPTDAPLRLPIQDVYTISGIGT
VPVGRIETGQMRAGDEVSFQPSDVGGEVKTIEMHHEEIDLAEPGDNVGFNVRGVGKDDIR
RGDVCGPADDPPTVAETFQAQIVVMQHPSVITAGYTPVFHAHTAQVACTVESLDQKIDPS
SGEVQEEDPDFIQAGDAAVVTVRPQKPLSIEPSEEIPELGSFAIRDMGQTVAAGRVLNVS
EK
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgacccaggagaaaccacaccagaatctggccatcatcggtcacgtagaccacggaaag
agcacgctcgtcggccgcttgatgttcgagacgggcagcgtcccggagcacgtcatcgaa
cagcaccgggaggaagccgaggagaaggggaaaggcggcttcgagttcgcctacgtcatg
gacaacctcgcggaagagcgggagcgagggctgacgatcgacatcgcccaccaggagttc
gagaccgacgagtacgacttcacaatcgtcgacacgcccgggcaccgcgacttcgtcaag
aacatgatcaccggcgcgagccaggcggaccacgctgtcctcgtggtcgccgccgacgac
ggcgtcgcgccccagacccaggaacacgtcttcctggctcgcacgctcggtatcgacgaa
ctcgtcgtcgccgtcaacaagatggacgtcgtcgagtacgaggagacccgcttcagggag
gtcgtcgccgaagtcaaggacctcctcgatcaggtccggttcgcgacggaggacgcctcg
ttcatcccgatctcggccttcgagggcgacaacgtcgcggagctaagcgaccagatgccc
tggtacgacggccgtgccctgctcgagacgctgaacgacctgccggtgccggagccgccg
acggacgcgccgctccgactcccgatccaggacgtctacacgatttcggggatcggcacc
gtcccggtcggacgcatcgagaccggacagatgcgggccggggacgaggtctcgttccag
cccagcgacgtcggcggcgaggtcaagaccatcgagatgcaccacgaggagatcgacctc
gcggaacccggtgacaacgtcggattcaacgtccgcggcgtcggcaaagacgacattcgg
cgcggcgacgtctgtgggcccgccgacgatccgccgaccgtcgccgagacgttccaggcc
cagatcgtcgtcatgcagcatccgagcgtgatcacggccggctatacgccggtcttccac
gctcacacggcccaggtcgcctgcacggtcgaatcgctcgaccagaagatcgatccctcc
agcggcgaggtccaggaggaggatcccgacttcatccaggcgggcgacgccgccgtcgtc
accgtccgtccgcagaagccgctcagcatcgagccgtcggaggagattcccgaactcggg
agcttcgcgattcgggacatgggacagacggtcgccgccggtcgggtcctgaacgtctcg
gagaagtaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (25)   

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