KEGG   Halobiforma lacisalsi: CHINAEXTREME05785
Entry
CHINAEXTREME05785 CDS       T04669                                 
Name
(GenBank) DUF91 domain-containing protein
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
hlc  Halobiforma lacisalsi
Brite
KEGG Orthology (KO) [BR:hlc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hlc03032]
    CHINAEXTREME05785
   03400 DNA repair and recombination proteins [BR:hlc03400]
    CHINAEXTREME05785
Enzymes [BR:hlc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     CHINAEXTREME05785
DNA replication proteins [BR:hlc03032]
 Prokaryotic type
  DNA Topoisomerases
   CHINAEXTREME05785
DNA repair and recombination proteins [BR:hlc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CHINAEXTREME05785
SSDB
Motif
Pfam: NucS_N zf-C4_Topoisom Auto_anti-p27 zf-UBR
Other DBs
NCBI-ProteinID: APW97313
UniProt: M0LJW6
Position
complement(1223167..1223940)
AA seq 257 aa
MIDDAIRVLAGDCTVIAEADDRQEYRGRMTTVVKPDNTVLVHDTDGYQPVAWLTRADSVS
SDRADGFTLVAKKDTQTLRIAAHDQDGFAHYPASVAGPVVGTCPDCGGALVRSNGVHCVD
CGDRYGVPADATIREDASNCDCGLPRMRVERGLAFDVCLDRDCESLDEAVSEAFDREWNC
PEPDCDGDLRILRRGGLIAGCEHYPDCDTGFAMPAGVIDGQCRCGLPTFDTGSGMRCLDA
TCDPIGERSPEEAAGDD
NT seq 774 nt   +upstreamnt  +downstreamnt
atgatcgacgacgcgatccgcgtcctcgcgggcgactgtaccgtgatcgccgaggccgac
gaccgccaggagtatcgcggccggatgacgacggtcgtcaagcccgacaacaccgtgctg
gtccacgacaccgacggctaccagcccgtcgcgtggctcacacgggccgacagcgtctcg
agcgaccgcgcggacggcttcaccctcgtcgcgaagaaggacacgcagacgctccggatc
gcggcccacgatcaggacgggttcgcccactaccccgcctcggtcgcgggcccggtcgtg
ggtacctgccccgactgcgggggcgcgctcgtccgctcgaacggcgtccactgcgtcgac
tgcggcgatcgctacggcgtgccagcggacgcgacgattcgggaggacgcgagcaactgc
gactgcgggctcccgcggatgcgcgtcgaacgggggctcgcgttcgacgtctgtctcgac
cgggactgcgagtccctggacgaggcggtctccgaagcgttcgaccgcgagtggaactgc
cccgagcccgactgtgacggtgacctccggatcctccgacgcggcgggctcatcgccggc
tgcgagcactaccccgattgcgacaccgggttcgcgatgcctgcaggggtgatcgacggc
cagtgtcgctgtggcctgccgaccttcgatacgggcagcgggatgcggtgtctcgacgcc
acctgcgatccgatcggggagcggtcgcccgaggaggcggccggggacgattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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