KEGG   Halobiforma lacisalsi: CHINAEXTREME09300
Entry
CHINAEXTREME09300 CDS       T04669                                 
Name
(GenBank) endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
hlc  Halobiforma lacisalsi
Pathway
hlc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hlc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CHINAEXTREME09300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hlc03400]
    CHINAEXTREME09300
Enzymes [BR:hlc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     CHINAEXTREME09300
DNA repair and recombination proteins [BR:hlc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     CHINAEXTREME09300
SSDB
Motif
Pfam: AP_endonuc_2 Gp22
Other DBs
NCBI-ProteinID: APW97963
UniProt: M0L4P7
Position
1946713..1947585
AA seq 290 aa
MNVGAHVSISGSRVSSDDETPPYDDIRNAVHRQRAFGGNCGQIFTTSPQVWAQPEISAEA
ADGFREESDELLEGPWVIHSSYLVNLCTPKEDLRRKSKESMQAELDAADKLGIPYVNVHL
GAHTGAGVEGGLDNAAGVIDDLDVPEGVQILIESDAGSGTKLGGEFEHLAGIIDRTETDI
GICIDTAHTLVAGNDLTTPEAVDETVGRFDDEVGLEYLEYIHLNDSKHDVGTHKDEHAHI
GEGYIGEDGMQAIVNHPDLRDLPFALETPTEDGRGFAWNIEKVKELRDDV
NT seq 873 nt   +upstreamnt  +downstreamnt
atgaacgtcggagcacacgtctcgatctccgggtcgcgcgtctcttcggacgacgaaacg
ccgccgtacgacgatatccgcaacgcggtccaccgccagcgggccttcggcggcaactgc
ggacagatcttcaccacctcgccgcaggtctgggcccagcccgagatcagcgccgaggcc
gccgacgggttccgcgaggagagcgacgaactgctcgaggggccgtgggtaatccactcc
tcgtatctggtcaatctctgtacgccgaaggaggatctacgccggaaatcgaaagagagc
atgcaggctgaactcgacgccgcggacaaactggggattccctacgtcaacgtccacctc
ggtgcccacaccggggctggcgtcgagggcggcctggacaacgccgcgggcgtcatcgac
gacctcgacgtgccggagggcgtccagatcctcatcgagtccgacgccggcagcggcacg
aaactcggcggcgagttcgaacacctcgcggggatcatcgaccgcaccgagaccgatatc
ggcatctgcatcgacacggctcacacgctcgtcgcgggcaacgacctgacgacgcccgaa
gccgtcgacgagacggtcgggcggttcgacgacgaggtcgggctggagtacctcgagtac
atccacctcaacgactcgaaacacgacgtcggcacgcacaaggacgaacacgcccacatc
ggcgagggctacatcggcgaagacggcatgcaggcgatcgtcaaccatcccgatctgcgg
gacctgccgttcgcgctcgagacgccgaccgaggacggccgcggcttcgcctggaacatc
gagaaggtcaaagaactgcgcgacgacgtctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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